RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 LRRC3Q9BY71 257 aa21.25■□□□□ 0.99
VCPKMT-203ENST00000484763 DHX35Q9H5Z1 703 aaKnown RBP21.25■□□□□ 0.99
VCPKMT-203ENST00000484763 ASAH2Q9NR71 780 aa21.25■□□□□ 0.99
VCPKMT-203ENST00000484763 ZDHHC7Q9NXF8 308 aa21.25■□□□□ 0.99
VCPKMT-203ENST00000484763 DENND4CQ5VZ89 1909 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 hCG_1818297A0A087WSY0 165 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 A0A1W2PPC1 479 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 CD48P09326 243 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 GABRR2P28476 465 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 ATP5C1P36542 298 aaKnown RBP21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 MLLT1Q03111 559 aaPredicted RBP21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 ITIH3Q06033 890 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 PPP2R5DQ14738 602 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 ANKS1BQ7Z6G8 1248 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 VSIG1Q86XK7 387 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 FAM71BQ8TC56 605 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 CALN1Q9BXU9 219 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 NACA2Q9H009 215 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 TKTL2Q9H0I9 626 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 PCDH18Q9HCL0 1135 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 ARHGEF38Q9NXL2 777 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 DNMT3LQ9UJW3 386 aa21.24■□□□□ 0.99
VCPKMT-203ENST00000484763 SPDYE4A6NLX3 237 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 XYLBO75191 536 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 CDC25CP30307 473 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 TBX4P57082 545 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 DPYSL3Q14195 570 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 LLGL1Q15334 1064 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 TRIP4Q15650 581 aaPredicted RBP21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 TAZQ16635 292 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 LRIT3Q3SXY7 679 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 MIB1Q86YT6 1006 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 HS6ST3Q8IZP7 471 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 SPATA4Q8NEY3 305 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 MAIP1Q8WWC4 291 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 GCNAQ96QF7 691 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 CORO1BQ9BR76 489 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 ZNF576Q9H609 170 aa21.23■□□□□ 0.99
VCPKMT-203ENST00000484763 KRIT1O00522 736 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 OAS1P00973 400 aaKnown RBP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 POU2F2P09086 479 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 SLC2A3P11169 496 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 L1CAMP32004 1257 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 KPNA1P52294 538 aaPredicted RBP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 PPP6R3Q5H9R7 873 aaPredicted RBP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 LRRN4CLQ8ND94 238 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 SLC39A13Q96H72 371 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 KCTD15Q96SI1 283 aaPredicted RBP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 ZNF670Q9BS34 389 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 HEMGNQ9BXL5 484 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 TMPRSS4Q9NRS4 437 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 EFR3BQ9Y2G0 817 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 GOLGA6L10A0A0M3HER8 536 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 ZNF487B1APH4 448 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 COCHO43405 550 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 FGF19O95750 216 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 GAREM2Q75VX8 874 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 ADAT2Q7Z6V5 191 aaKnown RBP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 MRPS31Q92665 395 aaKnown RBP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 FCRL2Q96LA5 508 aaPredicted RBP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 HERPUD2Q9BSE4 406 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 AP1M1Q9BXS5 423 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 ANLNQ9NQW6 1124 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 MTMR10Q9NXD2 777 aa21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 HBS1LQ9Y450 684 aaKnown RBP21.22■□□□□ 0.99
VCPKMT-203ENST00000484763 SLC12A8A0AV02 714 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 C2orf78A6NCI8 922 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 I6L893 689 aaPredicted RBP21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 TJP3O95049 919 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 APOEP02649 317 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 KRT10P13645 584 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 PTPN2P17706 415 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 EPHA5P54756 1037 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 C2orf54Q08AI8 447 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 KLF1Q13351 362 aaPredicted RBP21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 KAZNQ674X7 775 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 LEMD2Q8NC56 503 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 PRKD2Q9BZL6 878 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 NSUN3Q9H649 340 aaKnown RBP21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 RBM12Q9NTZ6 932 aaKnown RBP21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 RCOR3Q9P2K3 495 aaPredicted RBP21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 MYO9BQ13459 2157 aa21.21■□□□□ 0.99
VCPKMT-203ENST00000484763 TCRBV7S2A1N4TA0A589 114 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 KCNU1A8MYU2 1149 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 CCDC188H7C350 402 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 IGLV3-27P01718 113 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 MYL4P12829 197 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 ARL4AP40617 200 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 RING1Q06587 406 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 PYROXD2Q8N2H3 581 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 TSC1Q92574 1164 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 TRPC7Q9HCX4 862 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 HCFC1R1Q9NWW0 138 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 MMRN1Q13201 1228 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 KCNC3Q14003 757 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 ZNF697Q5TEC3 545 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 RFX6Q8HWS3 928 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 FAF2Q96CS3 445 aa21.2■□□□□ 0.98
VCPKMT-203ENST00000484763 HAPLN3Q96S86 360 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms