RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 AXIN1O15169 862 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 RPP40O75818 363 aaKnown RBP12.81□□□□□ -0.36
MSH5-216ENST00000484309 APBB3O95704 486 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 FYNP06241 537 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 HOXA6P31267 233 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 CHKAP35790 457 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 TNFRSF4P43489 277 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 ACADSBP45954 432 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 RPL34P49207 117 aaKnown RBP12.81□□□□□ -0.36
MSH5-216ENST00000484309 HARS2P49590 506 aaKnown RBP12.81□□□□□ -0.36
MSH5-216ENST00000484309 DGKEP52429 567 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 PTK2Q05397 1052 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 TYRO3Q06418 890 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 KLHDC7AQ5VTJ3 777 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 FYB2Q5VWT5 728 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 EGFLAMQ63HQ2 1017 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
MSH5-216ENST00000484309 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.81□□□□□ -0.36
MSH5-216ENST00000484309 WDTC1Q8N5D0 677 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 CAMKK1Q8N5S9 505 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 AOPEPQ8N6M6 819 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 CCDC26Q8TAB7 109 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 DQX1Q8TE96 717 aaKnown RBP12.81□□□□□ -0.36
MSH5-216ENST00000484309 DDI1Q8WTU0 396 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 CPXM1Q96SM3 734 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 ACOX2Q99424 681 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 CLEC4EQ9ULY5 219 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 CKAP5Q14008 2032 aa12.81□□□□□ -0.36
MSH5-216ENST00000484309 TNRC6BQ9UPQ9 1833 aaKnown RBP12.81□□□□□ -0.36
MSH5-216ENST00000484309 CEP250Q9BV73 2442 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 MUC22E2RYF6 1773 aaPredicted RBP12.8□□□□□ -0.36
MSH5-216ENST00000484309 A0A0A0MRY4 1105 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 GOLGA6L7A0A1B0GV03 622 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 CAPN9O14815 690 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 DCLK1O15075 740 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 ADAM23O75077 832 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 GRAP2O75791 330 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 PENKP01210 267 aaPredicted RBP12.8□□□□□ -0.36
MSH5-216ENST00000484309 CISD3P0C7P0 127 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 UCHL3P15374 230 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 SGSHP51688 502 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 COPB1P53618 953 aaKnown RBP12.8□□□□□ -0.36
MSH5-216ENST00000484309 TBX4P57082 545 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 MYL5Q02045 173 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 TAF5Q15542 800 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 CRY1Q16526 586 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 MEA1Q16626 185 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 SYPL2Q5VXT5 272 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 TAC4Q86UU9 113 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 FAM71AQ8IYT1 594 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 CPXM2Q8N436 756 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 MDGA1Q8NFP4 955 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 GAB3Q8WWW8 586 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 GANQ9H2C0 597 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 GMEB2Q9UKD1 530 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 PCDHGC3Q9UN70 934 aa12.8□□□□□ -0.36
MSH5-216ENST00000484309 CFAP54Q96N23 3096 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 SYNJ2BP-COX16A0A087WUM0 186 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 TCRBV21S2A2A0A5A6 115 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 EPHB6O15197 1021 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 SART1O43290 800 aaKnown RBP12.79□□□□□ -0.36
MSH5-216ENST00000484309 MOCS2O96007 188 aaPredicted RBP12.79□□□□□ -0.36
MSH5-216ENST00000484309 ERBB2P04626 1255 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 CYBBP04839 570 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 TPM2P07951 284 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 CNR2P34972 360 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 KRT9P35527 623 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 PITX1P78337 314 aaPredicted RBP12.79□□□□□ -0.36
MSH5-216ENST00000484309 SPEM2Q0P670 501 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 GEN1Q17RS7 908 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 PREPLQ4J6C6 727 aaPredicted RBP12.79□□□□□ -0.36
MSH5-216ENST00000484309 ANO6Q4KMQ2 910 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 EOGTQ5NDL2 527 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 FKBP15Q5T1M5 1219 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 LAIR1Q6GTX8 287 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 OR6B2Q6IFH4 312 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 RFWD3Q6PCD5 774 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 NUDT18Q6ZVK8 323 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 FAM183BPQ6ZVS7 135 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 TMEM110Q86TL2 294 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 KBTBD6Q86V97 674 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 FAM217AQ8IXS0 508 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
MSH5-216ENST00000484309 STK32AQ8WU08 396 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 HMGB4Q8WW32 186 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 PPP1R13BQ96KQ4 1090 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
MSH5-216ENST00000484309 NAA15Q9BXJ9 866 aaKnown RBP12.79□□□□□ -0.36
MSH5-216ENST00000484309 PDCL3Q9H2J4 239 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 NLRC4Q9NPP4 1024 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 FAM207AQ9NSI2 230 aaPredicted RBP12.79□□□□□ -0.36
MSH5-216ENST00000484309 COX16Q9P0S2 106 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 BCCIPQ9P287 314 aaKnown RBP eCLIP12.79□□□□□ -0.36
MSH5-216ENST00000484309 RAD54BQ9Y620 910 aa12.79□□□□□ -0.36
MSH5-216ENST00000484309 FRYLO94915 3013 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 CCDC163A0A0D9SF12 145 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 F8VZ95 297 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 IGLV3-27P01718 113 aa12.78□□□□□ -0.36
MSH5-216ENST00000484309 HOXB2P14652 356 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms