RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TUBP50607 506 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 DNA2P51530 1060 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 CDR1P51861 262 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 ITIH3Q06033 890 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 NNTQ13423 1086 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 CDO1Q16878 200 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 PPM1LQ5SGD2 360 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 ERMARDQ5T6L9 678 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 SDHAF4Q5VUM1 108 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 TTC9BQ8N6N2 239 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 LEMD2Q8NC56 503 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 SLC7A14Q8TBB6 771 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 GIPC2Q8TF65 315 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 SERPINB11Q96P15 392 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 GCNAQ96QF7 691 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 HOMER3Q9NSC5 361 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 SLC12A6Q9UHW9 1150 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 MAGED2Q9UNF1 606 aaPredicted RBP14.54□□□□□ -0.08
SMAD9-204ENST00000483941 NAALADL1Q9UQQ1 740 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 FAM186AA6NE01 2351 aa14.54□□□□□ -0.08
SMAD9-204ENST00000483941 RIF1Q5UIP0 2472 aaKnown RBP14.54□□□□□ -0.08
SMAD9-204ENST00000483941 PTPRDP23468 1912 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 A0A1W2PQH9 124 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 CTAGE15A4D2H0 777 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 XYLBO75191 536 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 SLU7O95391 586 aaKnown RBP14.53□□□□□ -0.08
SMAD9-204ENST00000483941 C8AP07357 584 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 POU2F2P09086 479 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 HNRNPA1P09651 372 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMAD9-204ENST00000483941 ZDHHC11BP0C7U3 371 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 CTAGE8P0CG41 777 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 SRGAP2BP0DMP2 458 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 PFKLP17858 780 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 AVPR2P30518 371 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 CXCR5P32302 372 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 CLCN4P51793 760 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 SLC25A11Q02978 314 aaKnown RBP14.53□□□□□ -0.08
SMAD9-204ENST00000483941 C15orf59Q2T9L4 293 aaPredicted RBP14.53□□□□□ -0.08
SMAD9-204ENST00000483941 BRMS1LQ5PSV4 323 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 CCDC70Q6NSX1 233 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 MSANTD2Q6P1R3 559 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 KLHDC10Q6PID8 442 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 BHLHA9Q7RTU4 235 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 DNAJB7Q7Z6W7 309 aaPredicted RBP14.53□□□□□ -0.08
SMAD9-204ENST00000483941 CTAGE6Q86UF2 777 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 CCDC50Q8IVM0 306 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 CTAGE4Q8IX94 777 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 KCTD6Q8NC69 237 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 NDRG1Q92597 394 aaKnown RBP14.53□□□□□ -0.08
SMAD9-204ENST00000483941 RNF34Q969K3 372 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 NTAN1Q96AB6 310 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 SMOC2Q9H3U7 446 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 ZWILCHQ9H900 591 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 DDIT4Q9NX09 232 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 GMIPQ9P107 970 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 PCSK1NQ9UHG2 260 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 ZMYM5Q9UJ78 669 aa14.53□□□□□ -0.08
SMAD9-204ENST00000483941 SOBPA7XYQ1 873 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 HIDE1A8MVS5 230 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 ZNF487B1APH4 448 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 SOAT2O75908 522 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 TJP3O95049 919 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 KRT1P04264 644 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 FYNP06241 537 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 RARGP13631 454 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 CDC25CP30307 473 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 CCR1P32246 355 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 PTPN7P35236 360 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 HDAC4P56524 1084 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 TAS2R40P59535 323 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 USP46P62068 366 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 NME3Q13232 169 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 KRT81Q14533 505 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 EFHC2Q5JST6 749 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 HECTD3Q5T447 861 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 SYPL2Q5VXT5 272 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 TRNP1Q6NT89 227 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 BNIPLQ7Z465 357 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 SCD5Q86SK9 330 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 RBM23Q86U06 439 aaKnown RBP14.52□□□□□ -0.09
SMAD9-204ENST00000483941 CREG2Q8IUH2 290 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 CMASQ8NFW8 434 aaPredicted RBP14.52□□□□□ -0.09
SMAD9-204ENST00000483941 GPR152Q8TDT2 470 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 DQX1Q8TE96 717 aaKnown RBP14.52□□□□□ -0.09
SMAD9-204ENST00000483941 COG1Q8WTW3 980 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 EDEM1Q92611 657 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 ALG3Q92685 438 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 KRT35Q92764 455 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 CAPZA3Q96KX2 299 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 PSMB7Q99436 277 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 MAK16Q9BXY0 300 aaKnown RBP14.52□□□□□ -0.09
SMAD9-204ENST00000483941 NACA2Q9H009 215 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 WDCPQ9H6R7 721 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 TLE6Q9H808 572 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.52□□□□□ -0.09
SMAD9-204ENST00000483941 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.52□□□□□ -0.09
SMAD9-204ENST00000483941 ZDHHC7Q9NXF8 308 aa14.52□□□□□ -0.09
SMAD9-204ENST00000483941 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.52□□□□□ -0.092e-7■■■■■ 28
SMAD9-204ENST00000483941 LRRD1A4D1F6 860 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms