RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 TFE3P19532 575 aaPredicted RBP17.85■□□□□ 0.45
MRPL28-210ENST00000483764 MIPP30301 263 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 PGFP49763 221 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 TWF1Q12792 350 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 TAF10Q12962 218 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 VEPH1Q14D04 833 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 HADHQ16836 314 aaKnown RBP17.85■□□□□ 0.45
MRPL28-210ENST00000483764 TTMPQ5BVD1 217 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 BTBD8Q5XKL5 378 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 STRADAQ7RTN6 431 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 PRELID2Q8N945 189 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 KREMEN2Q8NCW0 462 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 TBCBQ99426 244 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 TXLNGYQ9BZA5 131 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 STMN4Q9H169 189 aaPredicted RBP17.85■□□□□ 0.45
MRPL28-210ENST00000483764 NMUR1Q9HB89 426 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 RRN3Q9NYV6 651 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 GMIPQ9P107 970 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 FBXW11Q9UKB1 542 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 MAGED2Q9UNF1 606 aaPredicted RBP17.85■□□□□ 0.45
MRPL28-210ENST00000483764 CHD9Q3L8U1 2897 aa17.85■□□□□ 0.45
MRPL28-210ENST00000483764 PATJQ8NI35 1801 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 A0A1W2PQH9 124 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 C1RP00736 705 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 COILP38432 576 aaPredicted RBP17.84■□□□□ 0.45
MRPL28-210ENST00000483764 PTGIRP43119 386 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 SULT1E1P49888 294 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 IRAK1P51617 712 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 EPHB3P54753 998 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 PLD1Q13393 1074 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 TAF12Q16514 161 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 RAB6CQ53S08 254 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 CEP85LQ5SZL2 805 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 CCDC149Q6ZUS6 474 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 BBOF1Q8ND07 529 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 SLC7A14Q8TBB6 771 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 SLITRK1Q96PX8 696 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 ADAM33Q9BZ11 813 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 RAB6CQ9H0N0 254 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 PCSK1NQ9UHG2 260 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 USP18Q9UMW8 372 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 GBF1Q92538 1859 aa17.84■□□□□ 0.45
MRPL28-210ENST00000483764 M0QYT0 321 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 PRPSAP2O60256 369 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 ENDOD1O94919 500 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 KRT7P08729 469 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 HMGA1P17096 107 aaKnown RBP17.83■□□□□ 0.45
MRPL28-210ENST00000483764 NR1D1P20393 614 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 GJC1P36383 396 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 PSEN1P49768 467 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 CLCN4P51793 760 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 HDAC4P56524 1084 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 PITX1P78337 314 aaPredicted RBP17.83■□□□□ 0.45
MRPL28-210ENST00000483764 SLC25A11Q02978 314 aaKnown RBP17.83■□□□□ 0.45
MRPL28-210ENST00000483764 DHX9Q08211 1270 aaKnown RBP17.83■□□□□ 0.45
MRPL28-210ENST00000483764 CCDC137Q6PK04 289 aaKnown RBP17.83■□□□□ 0.45
MRPL28-210ENST00000483764 LRRC31Q6UY01 552 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 CHRDL2Q6WN34 429 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 POLNQ7Z5Q5 900 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 ARL8AQ96BM9 186 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 MYRFLQ96LU7 910 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 TMEM109Q9BVC6 243 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 LMAN2LQ9H0V9 348 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 ZWILCHQ9H900 591 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 TLR8Q9NR97 1041 aaKnown RBP17.83■□□□□ 0.45
MRPL28-210ENST00000483764 ZDHHC18Q9NUE0 388 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 WHRNQ9P202 907 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 NFS1Q9Y697 457 aa17.83■□□□□ 0.45
MRPL28-210ENST00000483764 CLASP2O75122 1294 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 ECEL1O95672 775 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 TRUB2O95900 331 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 GAS8O95995 478 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 C8AP07357 584 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 PYGMP11217 842 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 IL1R2P27930 398 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 SMAD3P84022 425 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 LMNB2Q03252 620 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 ZNF211Q13398 564 aaPredicted RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 OTUD1Q5VV17 481 aaPredicted RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 TXNRD3NBQ6F5E7 133 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 SCYL2Q6P3W7 929 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 BNIPLQ7Z465 357 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 DNAJB7Q7Z6W7 309 aaPredicted RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 KATNAL2Q8IYT4 538 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 CCHCR1Q8TD31 782 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 RNF139Q8WU17 664 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 UBLCP1Q8WVY7 318 aaPredicted RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 TIFAQ96CG3 184 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 HINFPQ9BQA5 517 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 FOXP3Q9BZS1 431 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 PABPC3Q9H361 631 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 PRO3102Q9H379 93 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 CNOT10Q9H9A5 744 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 OSER1Q9NX31 292 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 CLIC5Q9NZA1 410 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 ASB3Q9Y575 518 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 KRT14P02533 472 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 ZDHHC11BP0C7U3 371 aa17.82■□□□□ 0.44
MRPL28-210ENST00000483764 RDXP35241 583 aaKnown RBP17.82■□□□□ 0.44
MRPL28-210ENST00000483764 DEUP1Q05D60 604 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms