RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ARHGEF4Q9NR80 690 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 DTLQ9NZJ0 730 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 DSEQ9UL01 958 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 PCDHB8Q9UN66 801 aa9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-204ENST00000483763 NT5C1B-RDH14C9J2C7 533 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 TNFRSF10BO14763 440 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 KCNN4O15554 427 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 PIAS1O75925 651 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 FBXO21O94952 628 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 TYMPP19971 482 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 TGM2P21980 687 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 STIP1P31948 543 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 IRAK1P51617 712 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SKOR1P84550 965 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 IFRD2Q12894 506 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 AUHQ13825 339 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC39A12Q504Y0 691 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAXCQ5TGI0 409 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC39A5Q6ZMH5 540 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 KDM7AQ6ZMT4 941 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CCDC13Q8IYE1 715 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 TTC9BQ8N6N2 239 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CCDC110Q8TBZ0 833 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 PGLYRP2Q96PD5 576 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SEZ6LQ9BYH1 1024 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 PPP1R12CQ9BZL4 782 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 DMAP1Q9NPF5 467 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC12A6Q9UHW9 1150 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 STAP1Q9ULZ2 295 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SNX10Q9Y5X0 201 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 PITPNM1O00562 1244 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 RASGRF2O14827 1237 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CREB3O43889 395 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 AVILO75366 819 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CREB1P16220 341 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 DESP17661 470 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 ADRA1BP35368 520 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 GPR15P49685 360 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SLC5A3P53794 718 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 BASP1P80723 227 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAAP100Q0VG06 881 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 LRRC26Q2I0M4 334 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CCDC38Q502W7 563 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 TNFAIP8L3Q5GJ75 292 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 KCNT2Q6UVM3 1135 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 RSPO2Q6UXX9 243 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CAPN12Q6ZSI9 719 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CEP57Q86XR8 500 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 ZBED8Q8IZ13 594 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CYP4X1Q8N118 509 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 THEM5Q8N1Q8 247 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 AGGF1Q8N302 714 aaeCLIP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 MDM1Q8TC05 714 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 URGCPQ8TCY9 931 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 RNF139Q8WU17 664 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 VWCEQ96DN2 955 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 PGM2Q96G03 612 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 LGMNQ99538 433 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 NCAPGQ9BPX3 1015 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 TMEM109Q9BVC6 243 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 COLEC11Q9BWP8 271 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 CAPS2Q9BXY5 557 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 TSPYL1Q9H0U9 437 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 DDIT4Q9NX09 232 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 MARCH5Q9NX47 278 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 ABI2Q9NYB9 513 aaPredicted RBP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 NUDT5Q9UKK9 219 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SHOC2Q9UQ13 582 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 PCDHB7Q9Y5E2 793 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 SCN5AQ14524 2016 aa9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 ZNF638Q14966 1978 aaKnown RBP9.16□□□□□ -0.94
CDC42SE1-204ENST00000483763 ZNF487B1APH4 448 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 TMEM189-UBE2V1I3L0A0 370 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 MFSD11O43934 449 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 TADA2AO75478 443 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 CYP2C18P33260 490 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 GRIK1P39086 918 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 TSPY1Q01534 308 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 PDIA2Q13087 525 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 DDR2Q16832 855 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 TRIM60Q495X7 471 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 VARS2Q5ST30 1063 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 AGBL2Q5U5Z8 902 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAM171A1Q5VUB5 890 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 FOXR1Q6PIV2 292 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 LRRC31Q6UY01 552 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 DEFB128Q7Z7B8 93 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 UBE2Q1Q7Z7E8 422 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 ANKMY2Q8IV38 441 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 IGDCC3Q8IVU1 814 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 PPIL6Q8IXY8 311 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 C7orf61Q8IZ16 206 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 ATAD1Q8NBU5 361 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 GPR152Q8TDT2 470 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 RTP4Q96DX8 246 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 OLFM3Q96PB7 478 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 GEMIN8Q9NWZ8 242 aaKnown RBP9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 OSER1Q9NX31 292 aa9.15□□□□□ -0.94
CDC42SE1-204ENST00000483763 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.15□□□□□ -0.944e-6■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms