RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 EMC10Q5UCC4 262 aa13.42□□□□□ -0.26
COL21A1-209ENST00000482933 GRAMD4Q6IC98 578 aa13.42□□□□□ -0.26
COL21A1-209ENST00000482933 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
COL21A1-209ENST00000482933 RSRC2Q7L4I2 434 aaKnown RBP13.42□□□□□ -0.26
COL21A1-209ENST00000482933 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
COL21A1-209ENST00000482933 ZNF513Q8N8E2 541 aaPredicted RBP13.42□□□□□ -0.26
COL21A1-209ENST00000482933 DCLK3Q9C098 648 aa13.42□□□□□ -0.26
COL21A1-209ENST00000482933 DUSP15Q9H1R2 295 aaPredicted RBP13.42□□□□□ -0.26
COL21A1-209ENST00000482933 LRRC4Q9HBW1 653 aa13.42□□□□□ -0.26
COL21A1-209ENST00000482933 DNAJC17Q9NVM6 304 aaKnown RBP13.42□□□□□ -0.26
COL21A1-209ENST00000482933 STRIP2Q9ULQ0 834 aa13.42□□□□□ -0.26
COL21A1-209ENST00000482933 STARD13Q9Y3M8 1113 aa13.42□□□□□ -0.26
COL21A1-209ENST00000482933 ANTXRLA6NF34 631 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 SGK1O00141 431 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 SLC30A4O14863 429 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 CACNG3O60359 315 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 STC2O76061 302 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 ZBED1O96006 694 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 PAEPP09466 180 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 TKTL1P51854 596 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 YWHAGP61981 247 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL21A1-209ENST00000482933 PDE4CQ08493 712 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 EFEMP1Q12805 493 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
COL21A1-209ENST00000482933 PM20D1Q6GTS8 502 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 MIB1Q86YT6 1006 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 SFTPA1Q8IWL2 248 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 PARP9Q8IXQ6 854 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 UBR7Q8N806 425 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 MDGA1Q8NFP4 955 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 CTNND2Q9UQB3 1225 aa13.41□□□□□ -0.26
COL21A1-209ENST00000482933 DCLK1O15075 740 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 GADD45BO75293 160 aaPredicted RBP13.4□□□□□ -0.26
COL21A1-209ENST00000482933 FGFR1OPO95684 399 aaKnown RBP13.4□□□□□ -0.26
COL21A1-209ENST00000482933 SETSIPP0DME0 302 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 BMP6P22004 513 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 MPLP40238 635 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 DGKGP49619 791 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 SKOR1P84550 965 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 PAK1Q13153 545 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 BYSLQ13895 437 aaKnown RBP13.4□□□□□ -0.26
COL21A1-209ENST00000482933 STILQ15468 1287 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 DESI1Q6ICB0 168 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 SDE2Q6IQ49 451 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 TMEM270Q6UE05 265 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 PPM1KQ8N3J5 372 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 TRIML1Q8N9V2 468 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 KCTD13Q8WZ19 329 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 SPACA7Q96KW9 195 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 ULBP1Q9BZM6 244 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 VPS45Q9NRW7 570 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 OLA1Q9NTK5 396 aaKnown RBP13.4□□□□□ -0.26
COL21A1-209ENST00000482933 MARCH2Q9P0N8 246 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 BCCIPQ9P287 314 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL21A1-209ENST00000482933 PCDHB4Q9Y5E5 795 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 WDR87Q6ZQQ6 2873 aa13.4□□□□□ -0.26
COL21A1-209ENST00000482933 BIN1O00499 593 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 ADAM23O75077 832 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 NDUFV2P19404 249 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 NTSR1P30989 418 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 LIMK1P53667 647 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 MARSP56192 900 aaKnown RBP13.39□□□□□ -0.27
COL21A1-209ENST00000482933 CREB5Q02930 508 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 PMS2CLQ68D20 193 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 SIX6OS1Q8N1H7 587 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 PGBD3Q8N328 593 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 OLIG1Q8TAK6 271 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 UBA3Q8TBC4 463 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 DDX1Q92499 740 aaKnown RBP13.39□□□□□ -0.27
COL21A1-209ENST00000482933 PLD4Q96BZ4 506 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 SRRTQ9BXP5 876 aaKnown RBP13.39□□□□□ -0.27
COL21A1-209ENST00000482933 CNGB3Q9NQW8 809 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 TCRBV21S2A2A0A5A6 115 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 SLC12A8A0AV02 714 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 MED19A0JLT2 244 aaPredicted RBP13.39□□□□□ -0.27
COL21A1-209ENST00000482933 DCDC2BA2VCK2 349 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 TULP2O00295 520 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 O00370 1275 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 TRIM24O15164 1050 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 AFPP02771 609 aaKnown RBP13.39□□□□□ -0.27
COL21A1-209ENST00000482933 CYBBP04839 570 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 HMBSP08397 361 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 HNRNPLP14866 589 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL21A1-209ENST00000482933 CORO1AP31146 461 aaKnown RBP13.39□□□□□ -0.27
COL21A1-209ENST00000482933 STX17P56962 302 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 UBE2HP62256 183 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 GCNT1Q02742 428 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 ADIGQ0VDE8 80 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 CCDC6Q16204 474 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 CNGA2Q16280 664 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 LCLAT1Q6UWP7 414 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 CLEC17AQ6ZS10 378 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 TRIM59Q8IWR1 403 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 SCML4Q8N228 414 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 CPXM2Q8N436 756 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 EHBP1Q8NDI1 1231 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 LMO3Q8TAP4 145 aa13.39□□□□□ -0.27
COL21A1-209ENST00000482933 RNF139Q8WU17 664 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms