RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 GAB4Q2WGN9 574 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 FBXO43Q4G163 708 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 TAC4Q86UU9 113 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 FAM217AQ8IXS0 508 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 XPO6Q96QU8 1125 aaKnown RBP17.28■□□□□ 0.36
HMGN1-214ENST00000482733 PCDHB18PQ96TA0 734 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 ANP32EQ9BTT0 268 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 IRX2Q9BZI1 471 aaPredicted RBP17.28■□□□□ 0.36
HMGN1-214ENST00000482733 CHRDQ9H2X0 955 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 STOML2Q9UJZ1 356 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 CAPN11Q9UMQ6 739 aa17.28■□□□□ 0.36
HMGN1-214ENST00000482733 GRAP2O75791 330 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 IGLV3-25P01717 112 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 CYBBP04839 570 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 CALB1P05937 261 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 SLC2A3P11169 496 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 OPRD1P41143 372 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 MATKP42679 507 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 ZBED6P86452 979 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 KLHL30Q0D2K2 578 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 MTA1Q13330 715 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 TRIM14Q14142 442 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 FAM102AQ5T9C2 384 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-214ENST00000482733 FSTL4Q6MZW2 842 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 MAMSTRQ6ZN01 415 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 MMS22LQ6ZRQ5 1243 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 TPGS1Q6ZTW0 290 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 ARCQ7LC44 396 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 PHF13Q86YI8 300 aaPredicted RBP17.27■□□□□ 0.36
HMGN1-214ENST00000482733 SLC39A13Q96H72 371 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 PNKPQ96T60 521 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 DDX50Q9BQ39 737 aaKnown RBP17.27■□□□□ 0.36
HMGN1-214ENST00000482733 BBS2Q9BXC9 721 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 IRF2BPLQ9H1B7 796 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 FAM204AQ9H8W3 233 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.27■□□□□ 0.36
HMGN1-214ENST00000482733 ADAM22Q9P0K1 906 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 STAP1Q9ULZ2 295 aa17.27■□□□□ 0.36
HMGN1-214ENST00000482733 LUC7L2Q9Y383 392 aaKnown RBP17.27■□□□□ 0.36
HMGN1-214ENST00000482733 BZW2Q9Y6E2 419 aaKnown RBP17.27■□□□□ 0.36
HMGN1-214ENST00000482733 COL4A3Q01955 1670 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 IRAK2O43187 625 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 APOEP02649 317 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 TYRP14679 529 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 GSCP56915 257 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-214ENST00000482733 ADGRF1Q5T601 910 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 SPECC1LQ69YQ0 1117 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 SARM1Q6SZW1 724 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 NUDT18Q6ZVK8 323 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 C1orf210Q8IVY1 113 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 ETFBKMTQ8IXQ9 262 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 SLC30A5Q8TAD4 765 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 ADAM32Q8TC27 787 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 FCRL2Q96LA5 508 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-214ENST00000482733 C11orf70Q9BRQ4 267 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 SYT11Q9BT88 431 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 HAUS4Q9H6D7 363 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 SPATA6Q9NWH7 488 aaPredicted RBP17.26■□□□□ 0.35
HMGN1-214ENST00000482733 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.26■□□□□ 0.35
HMGN1-214ENST00000482733 DEC1Q9P2X7 70 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 SLC12A6Q9UHW9 1150 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 F5P12259 2224 aa17.26■□□□□ 0.35
HMGN1-214ENST00000482733 NEDD8-MDP1E9PL57 170 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 GOLGA8SH3BPF8 625 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 CACNG3O60359 315 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 ACSL4O60488 711 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 ATG13O75143 517 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 EGFP01133 1207 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 APODP05090 189 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 GRIA2P42262 883 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 PTPN5P54829 565 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 RNASE9P60153 205 aaKnown RBP17.25■□□□□ 0.35
HMGN1-214ENST00000482733 C1QBPQ07021 282 aaKnown RBP17.25■□□□□ 0.35
HMGN1-214ENST00000482733 EIF4EBP2Q13542 120 aaPredicted RBP17.25■□□□□ 0.35
HMGN1-214ENST00000482733 MPPE1Q53F39 396 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 C2CD6Q53TS8 623 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 ACAD10Q6JQN1 1059 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 CPLX3Q8WVH0 158 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 FBRSL1Q9HCM7 1045 aaKnown RBP17.25■□□□□ 0.35
HMGN1-214ENST00000482733 ARHGEF4Q9NR80 690 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 RBM12Q9NTZ6 932 aaKnown RBP17.25■□□□□ 0.35
HMGN1-214ENST00000482733 DDIT4Q9NX09 232 aa17.25■□□□□ 0.35
HMGN1-214ENST00000482733 A0A0A0MRY4 1105 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 LAMTOR5O43504 91 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 TULP3O75386 442 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 KAT7O95251 611 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 F9P00740 461 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 PENKP01210 267 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-214ENST00000482733 GYPCP04921 128 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 TPM1P09493 284 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 CCR1P32246 355 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 SLC6A11P48066 632 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 PTP4A2Q12974 167 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 MTAPQ13126 283 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 PPP2R5DQ14738 602 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 ZC3H12AQ5D1E8 599 aaKnown RBP17.24■□□□□ 0.35
HMGN1-214ENST00000482733 FYB2Q5VWT5 728 aa17.24■□□□□ 0.35
HMGN1-214ENST00000482733 E4F1Q66K89 784 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-214ENST00000482733 NAIF1Q69YI7 327 aaPredicted RBP17.24■□□□□ 0.35
HMGN1-214ENST00000482733 GRAMD4Q6IC98 578 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms