RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 PLD2O14939 933 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 MSH4O15457 936 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 FFAR2O15552 330 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 GAS7O60861 476 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 SIX3O95343 332 aaPredicted RBP6.94□□□□□ -1.3
CHD6-209ENST00000482596 P4HBP07237 508 aaKnown RBP6.94□□□□□ -1.3
CHD6-209ENST00000482596 GP1BAP07359 652 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 NFICP08651 508 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 GIMD1P0DJR0 217 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 ACADMP11310 421 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 HDCP19113 662 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 CD38P28907 300 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 HSPA4P34932 840 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 UGT1A5P35504 534 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 NXPH1P58417 271 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 JAKMIP3Q5VZ66 844 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 DTX1Q86Y01 620 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 DEPDC4Q8N2C3 294 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 CEP120Q8N960 986 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 OR4C6Q8NH72 309 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 IFI44Q8TCB0 444 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 TCP11Q8WWU5 503 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 GTPBP3Q969Y2 492 aaKnown RBP6.94□□□□□ -1.3
CHD6-209ENST00000482596 SGPP1Q9BX95 441 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 NUCKS1Q9H1E3 243 aaKnown RBP6.94□□□□□ -1.3
CHD6-209ENST00000482596 RUBCNLQ9H714 662 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 GPAMQ9HCL2 828 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 HELLSQ9NRZ9 838 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 HSFX1Q9UBD0 423 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 SERTAD1Q9UHV2 236 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 PCDHGA11Q9Y5H2 935 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 CITO14578 2027 aa6.94□□□□□ -1.3
CHD6-209ENST00000482596 PRAMEF33A0A0G2JMD5 474 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 AGRPO00253 132 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 GFRA2O00451 464 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 ZBTB39O15060 712 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 PRAMEF10O60809 474 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 HAPLN1P10915 354 aaPredicted RBP6.93□□□□□ -1.3
CHD6-209ENST00000482596 SMTNP53814 917 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 BCAT1P54687 386 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 GAD2Q05329 585 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 POU5F1BQ06416 359 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 MYBPC2Q14324 1141 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 KCNB1Q14721 858 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 STARD3Q14849 445 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 NOLC1Q14978 699 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHD6-209ENST00000482596 MCMDC2Q4G0Z9 681 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 LRCH2Q5VUJ6 765 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 WWC2Q6AWC2 1192 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 OVOS1Q6IE37 1185 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 RBM44Q6ZP01 1051 aaKnown RBP6.93□□□□□ -1.3
CHD6-209ENST00000482596 NAGSQ8N159 534 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 GRAMD1AQ96CP6 724 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 APOLD1Q96LR9 279 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 TRIM8Q9BZR9 551 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 SEMA6CQ9H3T2 930 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 PREBQ9HCU5 417 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 ANO2Q9NQ90 1003 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 AASDHPPTQ9NRN7 309 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 SMPD4Q9NXE4 827 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 FOXJ2Q9P0K8 574 aa6.93□□□□□ -1.3
CHD6-209ENST00000482596 A0A1W2PPC4 97 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 ANKRD62A6NC57 917 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 TMEM229AB2RXF0 380 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 KCNAB3O43448 404 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 DUX1O43812 170 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 EDIL3O43854 480 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 PDGFAP04085 211 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 GLRA2P23416 452 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 RPL9P32969 192 aaKnown RBP6.92□□□□□ -1.3
CHD6-209ENST00000482596 CSTF2P33240 577 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■■■■■ 31.4
CHD6-209ENST00000482596 NT5C2P49902 561 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 ADCY7P51828 1080 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 ART1P52961 327 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 NAPAP54920 295 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 SSRP1Q08945 709 aaKnown RBP6.92□□□□□ -1.3
CHD6-209ENST00000482596 AP3B2Q13367 1082 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 TFDP1Q14186 410 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 MXD4Q14582 209 aaPredicted RBP6.92□□□□□ -1.3
CHD6-209ENST00000482596 DRAP1Q14919 205 aaPredicted RBP6.92□□□□□ -1.3
CHD6-209ENST00000482596 GRAMD4Q6IC98 578 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 B3GNT9Q6UX72 402 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 ALKAL1Q6UXT8 129 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 ASB18Q6ZVZ8 466 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 B3GNT8Q7Z7M8 397 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 USP37Q86T82 979 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 LRRTM3Q86VH5 581 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 TMEM25Q86YD3 366 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 ZNF295-AS1Q8N0V1 137 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 FBXO39Q8N4B4 442 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 SCFD1Q8WVM8 642 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 SLC5A5Q92911 643 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 TEKT3Q9BXF9 490 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 OXCT2Q9BYC2 517 aaPredicted RBP6.92□□□□□ -1.3
CHD6-209ENST00000482596 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 KRT23Q9C075 422 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 RNF38Q9H0F5 515 aa6.92□□□□□ -1.3
CHD6-209ENST00000482596 RPF1Q9H9Y2 349 aaKnown RBP6.92□□□□□ -1.3
CHD6-209ENST00000482596 DNAJC17Q9NVM6 304 aaKnown RBP6.92□□□□□ -1.3
CHD6-209ENST00000482596 ABI2Q9NYB9 513 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms