RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	DGKG	P49619	791 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	PTK2	Q05397	1052 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	PDCL	Q13371	301 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	TAF5	Q15542	800 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	CRY1	Q16526	586 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	STX1A	Q16623	288 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	SYPL2	Q5VXT5	272 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	EGFLAM	Q63HQ2	1017 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	TSTD1	Q8NFU3	115 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	ADAM32	Q8TC27	787 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	PIWIL1	Q96J94	861 aa	Known RBP	13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	ACOX2	Q99424	681 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	ANO10	Q9NW15	660 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	RAB23	Q9ULC3	237 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	ZNF292	O60281	2723 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	EP300	Q09472	2414 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	PLXND1	Q9Y4D7	1925 aa		13.43	□□□□□ -0.26
ABCF3-215	ENST00000481116	GPR179	Q6PRD1	2367 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	RPP40	O75818	363 aa	Known RBP	13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	APBB3	O95704	486 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	PENK	P01210	267 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	CNR2	P34972	360 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	HARS2	P49590	506 aa	Known RBP	13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	SGSH	P51688	502 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	PITX1	P78337	314 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	ANO7	Q6IWH7	933 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	TMEM110	Q86TL2	294 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	KBTBD6	Q86V97	674 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	FAM217A	Q8IXS0	508 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	FAM71A	Q8IYT1	594 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	CPXM2	Q8N436	756 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	FAM160A2	Q8N612	972 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	C1orf131	Q8NDD1	294 aa	Known RBP	13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	CCDC26	Q8TAB7	109 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	DQX1	Q8TE96	717 aa	Known RBP	13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	DDI1	Q8WTU0	396 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	STK32A	Q8WU08	396 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	GAB3	Q8WWW8	586 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	GOLGA1	Q92805	767 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	CPXM1	Q96SM3	734 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	NAA15	Q9BXJ9	866 aa	Known RBP	13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	FBXO10	Q9UK96	956 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	PCDHGC3	Q9UN70	934 aa		13.42	□□□□□ -0.26
ABCF3-215	ENST00000481116	CCDC163	A0A0D9SF12	145 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	WASH3P	C4AMC7	463 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	GRAP2	O75791	330 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	IGLV3-27	P01718	113 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	UCHL3	P15374	230 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	KRT9	P35527	623 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	COPB1	P53618	953 aa	Known RBP	13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	TBX4	P57082	545 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	TYRO3	Q06418	890 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	SPEM2	Q0P670	501 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	MEA1	Q16626	185 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	GEN1	Q17RS7	908 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	PREPL	Q4J6C6	727 aa	Predicted RBP	13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	EOGT	Q5NDL2	527 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	TAF3	Q5VWG9	929 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	LAIR1	Q6GTX8	287 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	CAVIN1	Q6NZI2	390 aa	Known RBP	13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	RFWD3	Q6PCD5	774 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	AOPEP	Q8N6M6	819 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	MDGA1	Q8NFP4	955 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	PPP1R13B	Q96KQ4	1090 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	GAN	Q9H2C0	597 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	PARD6A	Q9NPB6	346 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	EBF1	Q9UH73	591 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	GMEB2	Q9UKD1	530 aa		13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.41	□□□□□ -0.26
ABCF3-215	ENST00000481116	TCRBV21S2A2	A0A5A6	115 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	CAPN9	O14815	690 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	EPHB6	O15197	1021 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	ERBB2	P04626	1255 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	CYBB	P04839	570 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	HOXD9	P28356	352 aa	Predicted RBP	13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	SLC6A4	P31645	630 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	MYL5	Q02045	173 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	NCAPH	Q15003	741 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	CCDC6	Q16204	474 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	PTPN20	Q4JDL3	420 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	ADGRF1	Q5T601	910 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	NADSYN1	Q6IA69	706 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	OR6B2	Q6IFH4	312 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	NUDT18	Q6ZVK8	323 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	FAM183BP	Q6ZVS7	135 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	TAC4	Q86UU9	113 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	RASSF3	Q86WH2	238 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	FRMD1	Q8N878	549 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	HMGB4	Q8WW32	186 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	RLN3	Q8WXF3	142 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	MYEOV	Q96EZ4	313 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	FCRL2	Q96LA5	508 aa	Predicted RBP	13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	LHX5	Q9H2C1	402 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	HSD3B7	Q9H2F3	369 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	NLRC4	Q9NPP4	1024 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	STOML2	Q9UJZ1	356 aa		13.4	□□□□□ -0.26
ABCF3-215	ENST00000481116	STARD13	Q9Y3M8	1113 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms