RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 GEN1Q17RS7 908 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 CCDC40Q4G0X9 1142 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 SIX6OS1Q8N1H7 587 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 DDI1Q8WTU0 396 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 RNF139Q8WU17 664 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 UCMAQ8WVF2 138 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 EDEM1Q92611 657 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 PLD4Q96BZ4 506 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 GTPBP4Q9BZE4 634 aaKnown RBP15.96■□□□□ 0.15
LIMS3-203ENST00000480744 FSCN3Q9NQT6 498 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 FBXO10Q9UK96 956 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 PILRBQ9UKJ0 227 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 SLC27A6Q9Y2P4 619 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 STON1Q9Y6Q2 735 aa15.96■□□□□ 0.15
LIMS3-203ENST00000480744 CKAP5Q14008 2032 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 GFRA2O00451 464 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 NDUFS2O75306 463 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 VDRP11473 427 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 LCP1P13796 627 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 TBXAS1P24557 533 aaPredicted RBP15.95■□□□□ 0.14
LIMS3-203ENST00000480744 FMO5P49326 533 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 ATXN3P54252 364 aaPredicted RBP15.95■□□□□ 0.14
LIMS3-203ENST00000480744 PM20D1Q6GTS8 502 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 KLHL10Q6JEL2 608 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 SLC23A3Q6PIS1 610 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 TMEM270Q6UE05 265 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 FMNL3Q8IVF7 1028 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 SPATA20Q8TB22 786 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 MRGPRX1Q96LB2 322 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 HSPA12BQ96MM6 686 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 TIGD1Q96MW7 591 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 GTPBP2Q9BX10 602 aaKnown RBP15.95■□□□□ 0.14
LIMS3-203ENST00000480744 METTL14Q9HCE5 456 aaKnown RBP15.95■□□□□ 0.14
LIMS3-203ENST00000480744 CD248Q9HCU0 757 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 CD93Q9NPY3 652 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 OLA1Q9NTK5 396 aaKnown RBP15.95■□□□□ 0.14
LIMS3-203ENST00000480744 SFMBT1Q9UHJ3 866 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 PCDHB4Q9Y5E5 795 aa15.95■□□□□ 0.14
LIMS3-203ENST00000480744 O00370 1275 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 TSPAN3O60637 253 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 KRT37O76014 449 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 IL12RB1P42701 662 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 HARS2P49590 506 aaKnown RBP15.94■□□□□ 0.14
LIMS3-203ENST00000480744 RGS7P49802 495 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 GFPT1Q06210 699 aaPredicted RBP15.94■□□□□ 0.14
LIMS3-203ENST00000480744 FOXC1Q12948 553 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 DUOXA1Q1HG43 343 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 BSPRYQ5W0U4 402 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 BHLHA9Q7RTU4 235 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 ANKS1BQ7Z6G8 1248 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 RGL4Q8IZJ4 473 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 CPXM2Q8N436 756 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 TRIML1Q8N9V2 468 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 DEFB124Q8NES8 71 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 CEP76Q8TAP6 659 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 DHTKD1Q96HY7 919 aaPredicted RBP15.94■□□□□ 0.14
LIMS3-203ENST00000480744 NT5C1BQ96P26 610 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 CIPCQ9C0C6 399 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 MAN1B1Q9UKM7 699 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 CLEC4EQ9ULY5 219 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 SLC6A14Q9UN76 642 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 PCDH15Q96QU1 1955 aa15.94■□□□□ 0.14
LIMS3-203ENST00000480744 KMT2BQ9UMN6 2715 aaPredicted RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 YJEFN3A6XGL0 299 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 E7ENQ6 273 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 PIK3R2O00459 728 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 SYNCRIPO60506 623 aaKnown RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 SETSIPP0DME0 302 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 CD44P16070 742 aaKnown RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 CSRP1P21291 193 aaKnown RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 HOXD12P35452 270 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 ARID5AQ03989 594 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 TRIP4Q15650 581 aaPredicted RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 FUT11Q495W5 492 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 PEAR1Q5VY43 1037 aaPredicted RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 SLC41A1Q8IVJ1 513 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 PPM1KQ8N3J5 372 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 UBR7Q8N806 425 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 SORCS1Q8WY21 1168 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 TFAP2BQ92481 460 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 PIWIL1Q96J94 861 aaKnown RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 CEP63Q96MT8 703 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 PRDM16Q9HAZ2 1276 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 THAP10Q9P2Z0 257 aaPredicted RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 KIAA1257Q9ULG3 409 aa15.93■□□□□ 0.14
LIMS3-203ENST00000480744 HBS1LQ9Y450 684 aaKnown RBP15.93■□□□□ 0.14
LIMS3-203ENST00000480744 M0QYV0 167 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 MSI1O43347 362 aaKnown RBP15.92■□□□□ 0.14
LIMS3-203ENST00000480744 SERPINF2P08697 491 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 CEACAM1P13688 526 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 SHC2P98077 582 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 CETN1Q12798 172 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 ZNF234Q14588 700 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 MPPE1Q53F39 396 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 LCLAT1Q6UWP7 414 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 RABEPKQ7Z6M1 372 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 CACUL1Q86Y37 369 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 NELFBQ8WX92 580 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 KCTD13Q8WZ19 329 aa15.92■□□□□ 0.14
LIMS3-203ENST00000480744 KAT5Q92993 513 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms