RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 THAP9Q9H5L6 903 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 APEX2Q9UBZ4 518 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 EVLQ9UI08 416 aaPredicted RBP11.96□□□□□ -0.49
CCM2-213ENST00000480658 FBXO10Q9UK96 956 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 AGO1Q9UL18 857 aaKnown RBP11.96□□□□□ -0.49
CCM2-213ENST00000480658 CNTN6Q9UQ52 1028 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 CEP83Q9Y592 693 aa11.96□□□□□ -0.49
CCM2-213ENST00000480658 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.49
CCM2-213ENST00000480658 EP300Q09472 2414 aaPredicted RBP11.96□□□□□ -0.5
CCM2-213ENST00000480658 SYNCRIPO60506 623 aaKnown RBP11.95□□□□□ -0.5
CCM2-213ENST00000480658 ADAM23O75077 832 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 LTFP02788 710 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 BMP6P22004 513 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 ERCC5P28715 1186 aaPredicted RBP11.95□□□□□ -0.5
CCM2-213ENST00000480658 PGFP49763 221 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 SFSWAPQ12872 951 aaKnown RBP11.95□□□□□ -0.5
CCM2-213ENST00000480658 EXOC3L4Q17RC7 722 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 FYB2Q5VWT5 728 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 LYSMD4Q5XG99 296 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 TRIM65Q6PJ69 517 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 TMEM92Q6UXU6 159 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 METTL3Q86U44 580 aaKnown RBP11.95□□□□□ -0.5
CCM2-213ENST00000480658 AHI1Q8N157 1196 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 LMO3Q8TAP4 145 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 FOXJ1Q92949 421 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 NUSAP1Q9BXS6 441 aaKnown RBP11.95□□□□□ -0.5
CCM2-213ENST00000480658 SUSD2Q9UGT4 822 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 NFE2L3Q9Y4A8 694 aa11.95□□□□□ -0.5
CCM2-213ENST00000480658 CACNA1AO00555 2505 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 YJEFN3A6XGL0 299 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 E7ENQ6 273 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 GOLGA6L22H0YM25 854 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 CAPN9O14815 690 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 MDM4O15151 490 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 GADD45BO75293 160 aaPredicted RBP11.94□□□□□ -0.5
CCM2-213ENST00000480658 ATP5BP06576 529 aaKnown RBP11.94□□□□□ -0.5
CCM2-213ENST00000480658 TPM2P07951 284 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 GLI1P08151 1106 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 SLC2A3P11169 496 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 LCP1P13796 627 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 OXTRP30559 389 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 GNA15P30679 374 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 RPL34P49207 117 aaKnown RBP11.94□□□□□ -0.5
CCM2-213ENST00000480658 BPIFB4P59827 614 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 SYCP2LQ5T4T6 812 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 RNF43Q68DV7 783 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 RRAGAQ7L523 313 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 SYT12Q8IV01 421 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 UBA3Q8TBC4 463 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 IPO4Q8TEX9 1081 aaKnown RBP11.94□□□□□ -0.5
CCM2-213ENST00000480658 MIS12Q9H081 205 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 UBE2TQ9NPD8 197 aaPredicted RBP11.94□□□□□ -0.5
CCM2-213ENST00000480658 NUDT5Q9UKK9 219 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 PLA2G4CQ9UP65 541 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 TLR6Q9Y2C9 796 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 DAAM1Q9Y4D1 1078 aa11.94□□□□□ -0.5
CCM2-213ENST00000480658 A0A1W2PQF6 199 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 APOEP02649 317 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 KLKB1P03952 638 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 HMBSP08397 361 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 CISD3P0C7P0 127 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 CHRM1P11229 460 aaPredicted RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 NCAM1P13591 858 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 GNSP15586 552 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 MTIF2P46199 727 aaKnown RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 DHPSP49366 369 aaPredicted RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 STX17P56962 302 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 RPL6Q02878 288 aaKnown RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 PTK2Q05397 1052 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 CAMK4Q16566 473 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 MAN2A1Q16706 1144 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 ACBD5Q5T8D3 534 aaPredicted RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 TTC39BQ5VTQ0 682 aaPredicted RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 EGFLAMQ63HQ2 1017 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 PMF1Q6P1K2 205 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 TOGARAM2Q6ZUX3 1019 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 ZDHHC17Q8IUH5 632 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 HJURPQ8NCD3 748 aaPredicted RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 TMA16Q96EY4 203 aaKnown RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 GBP4Q96PP9 640 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 PPP1R9BQ96SB3 815 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 EDEM2Q9BV94 578 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 PCED1AQ9H1Q7 454 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 CLSTN2Q9H4D0 955 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 POPDC2Q9HBU9 364 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 ST7Q9NRC1 585 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 ELOVL2Q9NXB9 296 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 THAP10Q9P2Z0 257 aaPredicted RBP11.93□□□□□ -0.5
CCM2-213ENST00000480658 SLC12A6Q9UHW9 1150 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 PAXBP1Q9Y5B6 917 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 DNAH14Q0VDD8 3507 aa11.93□□□□□ -0.5
CCM2-213ENST00000480658 SPTBN4Q9H254 2564 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 PLXND1Q9Y4D7 1925 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 PRRT4C9JH25 899 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 THAP12O43422 761 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 NDUFS2O75306 463 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 MOCS3O95396 460 aa11.92□□□□□ -0.5
CCM2-213ENST00000480658 IGLV3-27P01718 113 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms