RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 LRRC32Q14392 662 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 DMC1Q14565 340 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ASIC2Q16515 512 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 TSR1Q2NL82 804 aaKnown RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SLC44A4Q53GD3 710 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 TMEM196Q5HYL7 178 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 C10orf120Q5SQS8 335 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 STXBP5Q5T5C0 1151 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SDHAF4Q5VUM1 108 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 WDR59Q6PJI9 974 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF783Q6ZMS7 281 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 RSRC2Q7L4I2 434 aaKnown RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 KIAA0907Q7Z7F0 614 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SCUBE3Q8IX30 993 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 MCOLN2Q8IZK6 566 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 TXLNBQ8N3L3 684 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 PHTF2Q8N3S3 785 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 PJA1Q8NG27 643 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 UBA3Q8TBC4 463 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 FEZF2Q8TBJ5 459 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 GPR152Q8TDT2 470 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CSGALNACT1Q8TDX6 532 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 DQX1Q8TE96 717 aaKnown RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ING5Q8WYH8 240 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 NELL1Q92832 810 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ELMO3Q96BJ8 720 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 RSPRY1Q96DX4 576 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 PCMTD1Q96MG8 357 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 LRRC3BQ96PB8 259 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SLC22A12Q96S37 553 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 HAPLN3Q96S86 360 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 TBCBQ99426 244 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CNPY3Q9BT09 278 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 APOL5Q9BWW9 433 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 TRIM5Q9C035 493 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 NACA2Q9H009 215 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 PDCL3Q9H2J4 239 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CHRDQ9H2X0 955 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 HAUS4Q9H6D7 363 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SYNCQ9H7C4 482 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CCSER2Q9H7U1 834 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ECT2Q9H8V3 914 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 FBRSQ9HAH7 460 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 PRDM16Q9HAZ2 1276 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 LUC7LQ9NQ29 371 aaKnown RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 HPS4Q9NQG7 708 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SPHK2Q9NRA0 654 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 DUS2Q9NX74 493 aaKnown RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ARHGEF38Q9NXL2 777 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 ADAM22Q9P0K1 906 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 DLGAP2Q9P1A6 1054 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 UVRAGQ9P2Y5 699 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 PPARGC1AQ9UBK2 798 aaKnown RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CHORDC1Q9UHD1 332 aaPredicted RBP5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SLC12A6Q9UHW9 1150 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 MUTYHQ9UIF7 546 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CDH22Q9UJ99 828 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CCL26Q9Y258 94 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 SH3BP1Q9Y3L3 701 aa5.3□□□□□ -1.56
HDAC6-223ENST00000480525 CACNA1EQ15878 2313 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 A0A0A6YYK5 440 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 TYW5A2RUC4 315 aaKnown RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 TMEM221A6NGB7 291 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 BTNL10A8MVZ5 291 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 GOLGA6L6A8MZA4 724 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 AKR1B15C9JRZ8 316 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 SPECC1L-ADORA2AF8WAN1 911 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 M0R296 226 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 DDX3XO00571 662 aaKnown RBP eCLIP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CAPN9O14815 690 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 MDM4O15151 490 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 APOEP02649 317 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CYBBP04839 570 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CYP17A1P05093 508 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CHRM1P11229 460 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 KRT3P12035 628 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 NCAM1P13591 858 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 HNRNPLP14866 589 aaKnown RBP eCLIP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 TNFAIP3P21580 790 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 GDI1P31150 447 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 HOXC13P31276 330 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 SDC4P31431 198 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 CASP14P31944 242 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 GJA4P35212 333 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ETFBP38117 255 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 VIPR2P41587 438 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ARHGAP25P42331 645 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 TNFRSF4P43489 277 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ZNF75DP51815 510 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 PLK1P53350 603 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 GSDMDP57764 484 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 MRPS21P82921 87 aaKnown RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 PIGHQ14442 188 aaPredicted RBP5.29□□□□□ -1.56
HDAC6-223ENST00000480525 DHCR24Q15392 516 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 GAB4Q2WGN9 574 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 ARL13BQ3SXY8 428 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 MPPE1Q53F39 396 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 TMEM31Q5JXX7 168 aa5.29□□□□□ -1.56
HDAC6-223ENST00000480525 E4F1Q66K89 784 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms