RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 MACROD2A1Z1Q3 448 aa7□□□□□ -1.29
USP48-208ENST00000479177 TULP2O00295 520 aa7□□□□□ -1.29
USP48-208ENST00000479177 CLDN5O00501 218 aa7□□□□□ -1.29
USP48-208ENST00000479177 MTA2O94776 668 aa7□□□□□ -1.29
USP48-208ENST00000479177 SOD2P04179 222 aa7□□□□□ -1.29
USP48-208ENST00000479177 CALB1P05937 261 aa7□□□□□ -1.29
USP48-208ENST00000479177 OR4Q2P0C623 313 aa7□□□□□ -1.29
USP48-208ENST00000479177 FAM200BP0CF97 657 aa7□□□□□ -1.29
USP48-208ENST00000479177 RRM1P23921 792 aa7□□□□□ -1.29
USP48-208ENST00000479177 GLUD2P49448 558 aa7□□□□□ -1.29
USP48-208ENST00000479177 HADHBP55084 474 aaKnown RBP7□□□□□ -1.29
USP48-208ENST00000479177 GSCP56915 257 aaPredicted RBP7□□□□□ -1.29
USP48-208ENST00000479177 GPC5P78333 572 aa7□□□□□ -1.29
USP48-208ENST00000479177 FZD5Q13467 585 aa7□□□□□ -1.29
USP48-208ENST00000479177 POU4F3Q15319 338 aa7□□□□□ -1.29
USP48-208ENST00000479177 MAPRE1Q15691 268 aaKnown RBP7□□□□□ -1.29
USP48-208ENST00000479177 USP41Q3LFD5 358 aa7□□□□□ -1.29
USP48-208ENST00000479177 CTXN3Q4LDR2 81 aa7□□□□□ -1.29
USP48-208ENST00000479177 SLC39A12Q504Y0 691 aa7□□□□□ -1.29
USP48-208ENST00000479177 C2CD6Q53TS8 623 aa7□□□□□ -1.29
USP48-208ENST00000479177 LIN9Q5TKA1 542 aa7□□□□□ -1.29
USP48-208ENST00000479177 LLGL2Q6P1M3 1020 aa7□□□□□ -1.29
USP48-208ENST00000479177 CLEC20AQ6ZU45 233 aa7□□□□□ -1.29
USP48-208ENST00000479177 ANKS3Q6ZW76 656 aa7□□□□□ -1.29
USP48-208ENST00000479177 LRRTM3Q86VH5 581 aa7□□□□□ -1.29
USP48-208ENST00000479177 ANKRD52Q8NB46 1076 aa7□□□□□ -1.29
USP48-208ENST00000479177 MSANTD4Q8NCY6 345 aa7□□□□□ -1.29
USP48-208ENST00000479177 UBA3Q8TBC4 463 aa7□□□□□ -1.29
USP48-208ENST00000479177 IPO4Q8TEX9 1081 aaKnown RBP7□□□□□ -1.29
USP48-208ENST00000479177 SMARCD1Q96GM5 515 aa7□□□□□ -1.29
USP48-208ENST00000479177 TMEM169Q96HH4 297 aa7□□□□□ -1.29
USP48-208ENST00000479177 PCED1BQ96HM7 432 aa7□□□□□ -1.29
USP48-208ENST00000479177 VCPIP1Q96JH7 1222 aa7□□□□□ -1.29
USP48-208ENST00000479177 RNPC3Q96LT9 517 aaKnown RBP7□□□□□ -1.29
USP48-208ENST00000479177 NOX5Q96PH1 765 aa7□□□□□ -1.29
USP48-208ENST00000479177 MED10Q9BTT4 135 aa7□□□□□ -1.29
USP48-208ENST00000479177 RRAGDQ9NQL2 400 aaPredicted RBP7□□□□□ -1.29
USP48-208ENST00000479177 CHST7Q9NS84 486 aa7□□□□□ -1.29
USP48-208ENST00000479177 TMEM30AQ9NV96 361 aa7□□□□□ -1.29
USP48-208ENST00000479177 ADAM22Q9P0K1 906 aa7□□□□□ -1.29
USP48-208ENST00000479177 MYO1AQ9UBC5 1043 aa7□□□□□ -1.29
USP48-208ENST00000479177 MTRRQ9UBK8 725 aa7□□□□□ -1.29
USP48-208ENST00000479177 CNOT8Q9UFF9 292 aaKnown RBP7□□□□□ -1.29
USP48-208ENST00000479177 GPN3Q9UHW5 284 aaPredicted RBP7□□□□□ -1.29
USP48-208ENST00000479177 GUCA1BQ9UMX6 200 aa7□□□□□ -1.29
USP48-208ENST00000479177 RNF114Q9Y508 228 aa7□□□□□ -1.29
USP48-208ENST00000479177 PAXBP1Q9Y5B6 917 aa7□□□□□ -1.29
USP48-208ENST00000479177 PCDHGC5Q9Y5F6 944 aa7□□□□□ -1.29
USP48-208ENST00000479177 CAPN6Q9Y6Q1 641 aa7□□□□□ -1.29
USP48-208ENST00000479177 COL4A4P53420 1690 aaPredicted RBP7□□□□□ -1.29
USP48-208ENST00000479177 PLXNA3P51805 1871 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 MYO16Q9Y6X6 1858 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 GRID2IPA4D2P6 1211 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 LINC01553A4QN01 128 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 MEGF11A6BM72 1044 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 E5RJQ4 531 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 H7C4K7 107 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 KIF2AO00139 706 aaPredicted RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 XPO1O14980 1071 aaKnown RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 FANCGO15287 622 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 BUB1O43683 1085 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 KIF5CO60282 957 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 FGF18O76093 207 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 MOCS3O95396 460 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 ERBB2P04626 1255 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 CTNNB1P35222 781 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 GABRB2P47870 512 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 RPL34P49207 117 aaKnown RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 RGS7P49802 495 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 RABGGTBP53611 331 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 CACNA2D1P54289 1103 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 GP2P55259 537 aaKnown RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 ETF1P62495 437 aaKnown RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 DSG1Q02413 1049 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 SHHQ15465 462 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 PTPN14Q15678 1187 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 PSMD5Q16401 504 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 NFE2Q16621 373 aaPredicted RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 CFAP221Q4G0U5 840 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 RPS26P11Q5JNZ5 115 aaPredicted RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 ZNF569Q5MCW4 686 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 CYP4A22Q5TCH4 519 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 FAM109BQ6ICB4 259 aaPredicted RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 PLEKHA7Q6IQ23 1121 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 SLC8B1Q6J4K2 584 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 PMF1Q6P1K2 205 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 DNAJC24Q6P3W2 148 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 FDX2Q6P4F2 183 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 PRSS55Q6UWB4 352 aaPredicted RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 OLFML1Q6UWY5 402 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 RSPO2Q6UXX9 243 aaPredicted RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 C4orf50Q6ZRC1 276 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 DDX53Q86TM3 631 aaKnown RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 ERICH1Q86X53 443 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 CEP57Q86XR8 500 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 XYLT1Q86Y38 959 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 RHOT2Q8IXI1 618 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 GPR65Q8IYL9 337 aa6.99□□□□□ -1.29
USP48-208ENST00000479177 DCP1BQ8IZD4 617 aaKnown RBP6.99□□□□□ -1.29
USP48-208ENST00000479177 SLC35F6Q8N357 371 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms