RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 ARHGAP33O14559 1287 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 ZBTB24O43167 697 aaPredicted RBP17.52■□□□□ 0.4
TRIM13-208ENST00000478111 CORO1AP31146 461 aaKnown RBP17.52■□□□□ 0.4
TRIM13-208ENST00000478111 CHKAP35790 457 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 IL12RB1P42701 662 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 MXI1P50539 228 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 FAM193AP78312 1265 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 FUT11Q495W5 492 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 PM20D1Q6GTS8 502 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 TTC39CQ8N584 583 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 ANKRD52Q8NB46 1076 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 GATA6Q92908 595 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 DCLK3Q9C098 648 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 MKRN2Q9H000 416 aaKnown RBP17.52■□□□□ 0.4
TRIM13-208ENST00000478111 SLC32A1Q9H598 525 aa17.52■□□□□ 0.4
TRIM13-208ENST00000478111 CACNA1GO43497 2377 aa17.52■□□□□ 0.39
TRIM13-208ENST00000478111 SPAARA0A1B0GVQ0 90 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 KCNJ18B7U540 433 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 GJB3O75712 270 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 CD59P13987 128 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 YWHAGP61981 247 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRIM13-208ENST00000478111 CBWD6Q4V339 395 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 CBWD3Q5JTY5 395 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 CBWD5Q5RIA9 395 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 RABEPKQ7Z6M1 372 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 DENND1CQ8IV53 801 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 FAM217AQ8IXS0 508 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 CPXM2Q8N436 756 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 MINDY1Q8N5J2 469 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 NDRG1Q92597 394 aaKnown RBP17.51■□□□□ 0.39
TRIM13-208ENST00000478111 DNAI2Q9GZS0 605 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 SCAND2PQ9GZW5 306 aaPredicted RBP17.51■□□□□ 0.39
TRIM13-208ENST00000478111 FAM124BQ9H5Z6 455 aaPredicted RBP17.51■□□□□ 0.39
TRIM13-208ENST00000478111 ITM2CQ9NQX7 267 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 WSB2Q9NYS7 404 aaPredicted RBP17.51■□□□□ 0.39
TRIM13-208ENST00000478111 MARCH2Q9P0N8 246 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 USP36Q9P275 1121 aaKnown RBP17.51■□□□□ 0.39
TRIM13-208ENST00000478111 ZMIZ1Q9ULJ6 1067 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 COQ4Q9Y3A0 265 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 CABIN1Q9Y6J0 2220 aa17.51■□□□□ 0.39
TRIM13-208ENST00000478111 CETN3O15182 167 aa17.5■□□□□ 0.39
TRIM13-208ENST00000478111 OPHN1O60890 802 aa17.5■□□□□ 0.39
TRIM13-208ENST00000478111 MAOBP27338 520 aa17.5■□□□□ 0.39
TRIM13-208ENST00000478111 TKTL1P51854 596 aa17.5■□□□□ 0.39
TRIM13-208ENST00000478111 ATXN3P54252 364 aaPredicted RBP17.5■□□□□ 0.39
TRIM13-208ENST00000478111 TMEM215Q68D42 235 aa17.5■□□□□ 0.39
TRIM13-208ENST00000478111 KIAA1324Q6UXG2 1013 aaKnown RBP17.5■□□□□ 0.39
TRIM13-208ENST00000478111 ARHGAP18Q8N392 663 aa17.5■□□□□ 0.39
TRIM13-208ENST00000478111 HDDC3Q8N4P3 179 aa17.5■□□□□ 0.39
TRIM13-208ENST00000478111 PRDM16Q9HAZ2 1276 aa17.5■□□□□ 0.39
TRIM13-208ENST00000478111 DNAAF2Q9NVR5 837 aaKnown RBP17.5■□□□□ 0.39
TRIM13-208ENST00000478111 RALYQ9UKM9 306 aaKnown RBP17.5■□□□□ 0.39
TRIM13-208ENST00000478111 MUC22E2RYF6 1773 aaPredicted RBP17.49■□□□□ 0.39
TRIM13-208ENST00000478111 SLC12A8A0AV02 714 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 NPC1O15118 1278 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 HYAL3O43820 417 aaPredicted RBP17.49■□□□□ 0.39
TRIM13-208ENST00000478111 NDUFS2O75306 463 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 ZBED1O96006 694 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 CD6P30203 668 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 PRCPP42785 496 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 ZNF132P52740 706 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 COPAP53621 1224 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 SIM1P81133 766 aaPredicted RBP17.49■□□□□ 0.39
TRIM13-208ENST00000478111 PDE4CQ08493 712 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 PNOCQ13519 176 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 ZNF234Q14588 700 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 STARD3Q14849 445 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 TRIP4Q15650 581 aaPredicted RBP17.49■□□□□ 0.39
TRIM13-208ENST00000478111 ZC3H3Q8IXZ2 948 aaKnown RBP17.49■□□□□ 0.39
TRIM13-208ENST00000478111 RGL4Q8IZJ4 473 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 DNASE2BQ8WZ79 361 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 TOE1Q96GM8 510 aaKnown RBP17.49■□□□□ 0.39
TRIM13-208ENST00000478111 ULBP1Q9BZM6 244 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 GDPD2Q9HCC8 539 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 ELOVL2Q9NXB9 296 aa17.49■□□□□ 0.39
TRIM13-208ENST00000478111 XPO1O14980 1071 aaKnown RBP17.48■□□□□ 0.39
TRIM13-208ENST00000478111 STX10O60499 249 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 SYPP08247 313 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 EPB41P11171 864 aaKnown RBP17.48■□□□□ 0.39
TRIM13-208ENST00000478111 GOLGA7BQ2TAP0 167 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 PLEKHG6Q3KR16 790 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 SYCP2LQ5T4T6 812 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 ANKS1BQ7Z6G8 1248 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 TMPRSS6Q8IU80 811 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 UBR7Q8N806 425 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 SORCS1Q8WY21 1168 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 FOXJ1Q92949 421 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 PLD4Q96BZ4 506 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 SLC2A11Q9BYW1 496 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 KLK13Q9UKR3 277 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 TSPAN16Q9UKR8 245 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 STRIP2Q9ULQ0 834 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 NEUROG3Q9Y4Z2 214 aa17.48■□□□□ 0.39
TRIM13-208ENST00000478111 IGLV3-19P01714 112 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 PRKCHP24723 683 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 HOXD9P28356 352 aaPredicted RBP17.47■□□□□ 0.39
TRIM13-208ENST00000478111 TPMTP51580 245 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 PMS1P54277 932 aaKnown RBP17.47■□□□□ 0.39
TRIM13-208ENST00000478111 CUL2Q13617 745 aa17.47■□□□□ 0.39
TRIM13-208ENST00000478111 EIF4HQ15056 248 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms