RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 GTPBP2Q9BX10 602 aaKnown RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 ULBP1Q9BZM6 244 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 RMND1Q9NWS8 449 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 THAP10Q9P2Z0 257 aaPredicted RBP11.91□□□□□ -0.5
HDLBP-236ENST00000477477 COQ4Q9Y3A0 265 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 CFAP47Q6ZTR5 3102 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 GON4LQ3T8J9 2241 aa11.91□□□□□ -0.5
HDLBP-236ENST00000477477 C1QTNF9BB2RNN3 333 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 TULP2O00295 520 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 XPO1O14980 1071 aaKnown RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 NDUFS2O75306 463 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 ZBED1O96006 694 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 CYBBP04839 570 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 C1QTNF9P0C862 333 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 IL12RB1P42701 662 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 PRCPP42785 496 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 ZNF132P52740 706 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 BCAT1P54687 386 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 PDE4CQ08493 712 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 CUL2Q13617 745 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 EIF4HQ15056 248 aaKnown RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 TRIP4Q15650 581 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 COBLL1Q53SF7 1204 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 ZNF658Q5TYW1 1059 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 TCERG1LQ5VWI1 586 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 ANKS1BQ7Z6G8 1248 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 METTL3Q86U44 580 aaKnown RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 DENND1CQ8IV53 801 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 FMR1NBQ8N0W7 255 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 MINDY1Q8N5J2 469 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 UCMAQ8WVF2 138 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 FOXJ1Q92949 421 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 PLD4Q96BZ4 506 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 PIWIL1Q96J94 861 aaKnown RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 ADAM33Q9BZ11 813 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 USP36Q9P275 1121 aaKnown RBP11.9□□□□□ -0.5
HDLBP-236ENST00000477477 TSPAN16Q9UKR8 245 aa11.9□□□□□ -0.5
HDLBP-236ENST00000477477 ASCC3Q8N3C0 2202 aaKnown RBP11.9□□□□□ -0.51
HDLBP-236ENST00000477477 ARHGAP33O14559 1287 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 OPHN1O60890 802 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 CD6P30203 668 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 PMS1P54277 932 aaKnown RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 YWHAEP62258 255 aaKnown RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 FKBP3Q00688 224 aaKnown RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 BST2Q10589 180 aaKnown RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 ZNF234Q14588 700 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 E2F5Q15329 346 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 SGO2Q562F6 1265 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 SYCP2LQ5T4T6 812 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 ANKRD40Q6AI12 368 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 RGL4Q8IZJ4 473 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 RBBP8NLQ8NC74 664 aaPredicted RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 OR2I1PQ8NGU4 316 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 NDRG1Q92597 394 aaKnown RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 GSDMAQ96QA5 445 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 TSG101Q99816 390 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 SCNM1Q9BWG6 230 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 SLC2A11Q9BYW1 496 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 MKRN2Q9H000 416 aaKnown RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 PRDM16Q9HAZ2 1276 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 LRRC4Q9HBW1 653 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 OLA1Q9NTK5 396 aaKnown RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 ELOVL2Q9NXB9 296 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 HESX1Q9UBX0 185 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 SUSD2Q9UGT4 822 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 CLEC4EQ9ULY5 219 aa11.89□□□□□ -0.51
HDLBP-236ENST00000477477 HBS1LQ9Y450 684 aaKnown RBP11.89□□□□□ -0.51
HDLBP-236ENST00000477477 PCDH15Q96QU1 1955 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 CHD6Q8TD26 2715 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 SPAARA0A1B0GVQ0 90 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 O00370 1275 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 SYNCRIPO60506 623 aaKnown RBP11.88□□□□□ -0.51
HDLBP-236ENST00000477477 SYPP08247 313 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 VDRP11473 427 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 CD19P15391 556 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 PRKCHP24723 683 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-236ENST00000477477 HARS2P49590 506 aaKnown RBP11.88□□□□□ -0.51
HDLBP-236ENST00000477477 LRRC63Q05C16 580 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 ADIGQ0VDE8 80 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 PLEKHG6Q3KR16 790 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 TMEM215Q68D42 235 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 FMNL3Q8IVF7 1028 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 UBR7Q8N806 425 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 SPATA20Q8TB22 786 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 DDI1Q8WTU0 396 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 SORCS1Q8WY21 1168 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 SLC35C1Q96A29 364 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 TOE1Q96GM8 510 aaKnown RBP11.88□□□□□ -0.51
HDLBP-236ENST00000477477 IPO9Q96P70 1041 aaKnown RBP11.88□□□□□ -0.51
HDLBP-236ENST00000477477 CIPCQ9C0C6 399 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 ITM2CQ9NQX7 267 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 DNAAF2Q9NVR5 837 aaKnown RBP11.88□□□□□ -0.51
HDLBP-236ENST00000477477 WSB2Q9NYS7 404 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-236ENST00000477477 ARMCX3Q9UH62 379 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-236ENST00000477477 CACNA1EQ15878 2313 aa11.88□□□□□ -0.51
HDLBP-236ENST00000477477 IGF2RP11717 2491 aa11.87□□□□□ -0.51
HDLBP-236ENST00000477477 ASPMQ8IZT6 3477 aa11.87□□□□□ -0.51
HDLBP-236ENST00000477477 TRIM49BA6NDI0 452 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms