RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 GRIK3Q13003 919 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 SPARCL1Q14515 664 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 CASC4Q6P4E1 433 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 VSTM1Q6UX27 236 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 TAOK1Q7L7X3 1001 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 FAM35AQ86V20 835 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 ZNF280BQ86YH2 543 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 SCN4BQ8IWT1 228 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 FAM167BQ9BTA0 163 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 ETNK1Q9HBU6 452 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 FGFR1OP2Q9NVK5 253 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 Q9Y3F1 56 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 CCDC78A2IDD5 438 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 FAM107AO95990 144 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 MRPS5P82675 430 aaKnown RBP13.87□□□□□ -0.19
HDAC7-221ENST00000477203 DRICH1Q6PGQ1 229 aaPredicted RBP13.87□□□□□ -0.19
HDAC7-221ENST00000477203 HACE1Q8IYU2 909 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 ZMIZ2Q8NF64 920 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 MYLPFQ96A32 169 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 CAPNS2Q96L46 248 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 MTMR10Q9NXD2 777 aa13.87□□□□□ -0.19
HDAC7-221ENST00000477203 MYO7AQ13402 2215 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 PRRC2BQ5JSZ5 2229 aaKnown RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 KBTBD13C9JR72 458 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 XPO1O14980 1071 aaKnown RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 SETSIPP0DME0 302 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 SRGAP2BP0DMP2 458 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 NUGGCQ68CJ6 796 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 PPP1R21Q6ZMI0 780 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 LRRTM3Q86VH5 581 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 NAT8LQ8N9F0 302 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 SERPINB12Q96P63 405 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 HNRNPABQ99729 332 aaKnown RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 USP29Q9HBJ7 922 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 MFSD11O43934 449 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 CDH16O75309 829 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 USP12O75317 370 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 GCAP28676 217 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 ARL4AP40617 200 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 MATKP42679 507 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 TM4SF4P48230 202 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 GATMP50440 423 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 RNASELQ05823 741 aaKnown RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 RBBP5Q15291 538 aaKnown RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 XKR4Q5GH76 650 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 TOP6BLQ8N6T0 577 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 CCHCR1Q8TD31 782 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 ATXN2LQ8WWM7 1075 aaKnown RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 FAM129AQ9BZQ8 928 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 FARP1Q9Y4F1 1045 aaPredicted RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 NT5C1B-RDH14C9J2C7 533 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 STX2P32856 288 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 OR1G1P47890 313 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 PGFP49763 221 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 ACLYP53396 1101 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 ACAP1Q15027 740 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 CAPRIN2Q6IMN6 1127 aaKnown RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 UNC5BQ8IZJ1 945 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 CHMP6Q96FZ7 201 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 CELF6Q96J87 481 aaKnown RBP13.86□□□□□ -0.19
HDAC7-221ENST00000477203 UBN1Q9NPG3 1134 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 SHOC2Q9UQ13 582 aa13.86□□□□□ -0.19
HDAC7-221ENST00000477203 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 I6L893 689 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 SOAT2O75908 522 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 MOCS2O96007 188 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 WARSP23381 471 aaKnown RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 PTPN7P35236 360 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 SNX16P57768 344 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 UPP1Q16831 310 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 EFHC1Q5JVL4 640 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 CES3Q6UWW8 571 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 AGGF1Q8N302 714 aaeCLIP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 MPP5Q8N3R9 675 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 OR10T2Q8NGX3 314 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 SEC16BQ96JE7 1060 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 STMN4Q9H169 189 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 TRABDQ9H4I3 376 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 SLC38A7Q9NVC3 462 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 ABI2Q9NYB9 513 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 DTLQ9NZJ0 730 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 SLC17A6Q9P2U8 582 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 PDCD11Q14690 1871 aaKnown RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 CA4P22748 312 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 LRPAP1P30533 357 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 HOXC8P31273 242 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 SESN2P58004 480 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 PDK2Q15119 407 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 PCBP1Q15365 356 aaKnown RBP eCLIP13.85□□□□□ -0.193e-7■■■■□ 25.7
HDAC7-221ENST00000477203 TAZQ16635 292 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 SPDYCQ5MJ68 293 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 PRPF39Q86UA1 669 aaKnown RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 PPM1NQ8N819 430 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 ROPN1BQ9BZX4 212 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 CNOT10Q9H9A5 744 aaKnown RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 ROPN1Q9HAT0 212 aaPredicted RBP13.85□□□□□ -0.19
HDAC7-221ENST00000477203 DNAJB4Q9UDY4 337 aa13.85□□□□□ -0.19
HDAC7-221ENST00000477203 C5orf42Q9H799 3197 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms