RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 HOXD12P35452 270 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 EIF4A3P38919 411 aaKnown RBP12.14□□□□□ -0.47
LSM2-212ENST00000477182 GALK1P51570 392 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 FMO1Q01740 532 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 CDR2Q01850 454 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 CYP27A1Q02318 531 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 GOLGA7BQ2TAP0 167 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 PPP1R26Q5T8A7 1209 aaPredicted RBP12.14□□□□□ -0.47
LSM2-212ENST00000477182 ARHGAP17Q68EM7 881 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 SLC23A3Q6PIS1 610 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 GAREM2Q75VX8 874 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 LPCAT2Q7L5N7 544 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 ITIH5Q86UX2 942 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 LRRC8AQ8IWT6 810 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 FUKQ8N0W3 1084 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 SLC2A14Q8TDB8 520 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 ADAMTS14Q8WXS8 1223 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 PCED1BQ96HM7 432 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 BAG1Q99933 345 aaPredicted RBP12.14□□□□□ -0.47
LSM2-212ENST00000477182 AGPAT1Q99943 283 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 P2RY13Q9BPV8 354 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 FAM83CQ9BQN1 747 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 SYT11Q9BT88 431 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 MED10Q9BTT4 135 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 TASP1Q9H6P5 420 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 SEPT11Q9NVA2 429 aaKnown RBP12.14□□□□□ -0.47
LSM2-212ENST00000477182 RAXQ9Y2V3 346 aa12.14□□□□□ -0.47
LSM2-212ENST00000477182 BZW2Q9Y6E2 419 aaKnown RBP12.14□□□□□ -0.47
LSM2-212ENST00000477182 URB1O60287 2271 aaKnown RBP12.14□□□□□ -0.47
LSM2-212ENST00000477182 MYO16Q9Y6X6 1858 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 ZNF638Q14966 1978 aaKnown RBP12.13□□□□□ -0.47
LSM2-212ENST00000477182 M0QYV0 167 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 MED7O43513 233 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 PRAMEF12O95522 483 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 TNFAIP3P21580 790 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 BCKDHBP21953 392 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 GABRR2P28476 465 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 CDK17Q00537 523 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 GPR17Q13304 367 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 STILQ15468 1287 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
LSM2-212ENST00000477182 CNGA2Q16280 664 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 SPDYCQ5MJ68 293 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 DENND1BQ6P3S1 775 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 LCLAT1Q6UWP7 414 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 PAQR9Q6ZVX9 377 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 DNAJB7Q7Z6W7 309 aaPredicted RBP12.13□□□□□ -0.47
LSM2-212ENST00000477182 FAM35AQ86V20 835 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 RASSF3Q86WH2 238 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 ZNF677Q86XU0 584 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 TMEM139Q8IV31 216 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 PASD1Q8IV76 773 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 CEP76Q8TAP6 659 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 PSMG2Q969U7 264 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 PGLYRP2Q96PD5 576 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 GCNAQ96QF7 691 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 HNRNPABQ99729 332 aaKnown RBP12.13□□□□□ -0.47
LSM2-212ENST00000477182 TPSD1Q9BZJ3 242 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 ZNF518BQ9C0D4 1074 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 PDCL3Q9H2J4 239 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 NHEJ1Q9H9Q4 299 aaPredicted RBP12.13□□□□□ -0.47
LSM2-212ENST00000477182 HPS4Q9NQG7 708 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 ABI2Q9NYB9 513 aaPredicted RBP12.13□□□□□ -0.47
LSM2-212ENST00000477182 DKK4Q9UBT3 224 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 TSPAN16Q9UKR8 245 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.13□□□□□ -0.47
LSM2-212ENST00000477182 PCDHB9Q9Y5E1 797 aa12.13□□□□□ -0.47
LSM2-212ENST00000477182 ATP8B3O60423 1300 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 KIAA1549LQ6ZVL6 1849 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 TNRC6BQ9UPQ9 1833 aaKnown RBP12.12□□□□□ -0.47
LSM2-212ENST00000477182 PLXNB3Q9ULL4 1909 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 FAM170AA1A519 330 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 MTMR11A4FU01 709 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 SOWAHDA6NJG2 315 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 MAP3K13O43283 966 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 KALRNO60229 2985 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 VNN2O95498 520 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 BDNFP23560 247 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 CDC25CP30307 473 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 FAM193AP78312 1265 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 TRIP6Q15654 476 aaKnown RBP12.12□□□□□ -0.47
LSM2-212ENST00000477182 NFE2Q16621 373 aaPredicted RBP12.12□□□□□ -0.47
LSM2-212ENST00000477182 CC2D1AQ6P1N0 951 aaPredicted RBP12.12□□□□□ -0.47
LSM2-212ENST00000477182 C4orf50Q6ZRC1 276 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 RABEPKQ7Z6M1 372 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 ZNF605Q86T29 641 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 TTC30AQ86WT1 665 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 TMTC1Q8IUR5 882 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 SPATA2LQ8IUW3 424 aaPredicted RBP12.12□□□□□ -0.47
LSM2-212ENST00000477182 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 MDM1Q8TC05 714 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 CHFRQ96EP1 664 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 SPACA7Q96KW9 195 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 ZNF830Q96NB3 372 aaPredicted RBP12.12□□□□□ -0.47
LSM2-212ENST00000477182 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
LSM2-212ENST00000477182 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms