RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 CT47A1Q5JQC4 288 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 C10orf76Q5T2E6 689 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 BSPRYQ5W0U4 402 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 PMF1Q6P1K2 205 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 BHLHA9Q7RTU4 235 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 PHTF2Q8N3S3 785 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 ALLCQ8N6M5 410 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 ZNF513Q8N8E2 541 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 NDRG1Q92597 394 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 POLMQ9NP87 494 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 EBF1Q9UH73 591 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 HBS1LQ9Y450 684 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 ADAMTS9Q9P2N4 1935 aa11.91□□□□□ -0.5
NUDCD3-206ENST00000475952 IGSF10Q6WRI0 2623 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 PIK3R2O00459 728 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 SART1O43290 800 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 THAP12O43422 761 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 LETM1O95202 739 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 KLF8O95600 359 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 CYBBP04839 570 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 SLC9A1P19634 815 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 HOXC13P31276 330 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 KIR2DL1P43626 348 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 HARS2P49590 506 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 DGKGP49619 791 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 ZNF445P59923 1031 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 MESP2Q0VG99 397 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 SF3A2Q15428 464 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 CRY1Q16526 586 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 ARHGAP44Q17R89 818 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 AASDHQ4L235 1098 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 SMYD5Q6GMV2 418 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 ANO7Q6IWH7 933 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 CACNA2D4Q7Z3S7 1137 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 C11orf74Q86VG3 221 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 IRF2BP1Q8IU81 584 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 DENND1CQ8IV53 801 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 CPXM2Q8N436 756 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 CCDC33Q8N5R6 958 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 FAM160A2Q8N612 972 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 IL17RCQ8NAC3 791 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 TXNDC5Q8NBS9 432 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 EDEM1Q92611 657 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 BHMTQ93088 406 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 ZSWIM1Q9BR11 485 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 ST7Q9NRC1 585 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 RXFP3Q9NSD7 469 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 POLR3BQ9NW08 1133 aaPredicted RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 AGO1Q9UL18 857 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 STARD13Q9Y3M8 1113 aa11.9□□□□□ -0.5
NUDCD3-206ENST00000475952 C1QTNF9BB2RNN3 333 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 SGK1O00141 431 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 LATS1O95835 1130 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 CALCAP01258 141 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 LTFP02788 710 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 KLKB1P03952 638 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 C1QTNF9P0C862 333 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 EEF1GP26641 437 aaKnown RBP11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 PON1P27169 355 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 USP8P40818 1118 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 GPD2P43304 727 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 ACADSBP45954 432 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 TRIP4Q15650 581 aaPredicted RBP11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 MSANTD2Q6P1R3 559 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 GJB7Q6PEY0 223 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 RASSF3Q86WH2 238 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 SFTPA1Q8IWL2 248 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 SHC3Q92529 594 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 LOXL4Q96JB6 756 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 TUBGCP2Q9BSJ2 902 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 TRIM62Q9BVG3 475 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 NDST4Q9H3R1 872 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 PLK2Q9NYY3 685 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 BCCIPQ9P287 314 aaKnown RBP eCLIP11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 SFMBT1Q9UHJ3 866 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 ZMIZ1Q9ULJ6 1067 aa11.89□□□□□ -0.51
NUDCD3-206ENST00000475952 KCNJ18B7U540 433 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 PES1O00541 588 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 TRIM24O15164 1050 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 PENKP01210 267 aaPredicted RBP11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 HOXB2P14652 356 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 RPL34P49207 117 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 KCNJ12Q14500 433 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 ELF2Q15723 593 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 CCDC6Q16204 474 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 VWA3BQ502W6 1294 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 USP39Q53GS9 565 aaKnown RBP11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 HSP90AA4PQ58FG1 418 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 FYB2Q5VWT5 728 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 NUGGCQ68CJ6 796 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 SDE2Q6IQ49 451 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 UNQ6494/PRO21346Q6UXR6 183 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 TMEM92Q6UXU6 159 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 FAM217AQ8IXS0 508 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 CHPFQ8IZ52 775 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 MDGA1Q8NFP4 955 aa11.88□□□□□ -0.51
NUDCD3-206ENST00000475952 GPT2Q8TD30 523 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms