RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ZNF778Q96MU6 729 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 C1QTNF7Q9BXJ2 289 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 TMEM8AQ9HCN3 771 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 ARFGAP3Q9NP61 516 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 ABHD10Q9NUJ1 306 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 SLC39A10Q9ULF5 831 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 DTNAQ9Y4J8 743 aa7.4□□□□□ -1.22
SMC5-203ENST00000475540 SLC3A2P08195 630 aaKnown RBP7.39□□□□□ -1.23
SMC5-203ENST00000475540 SFPQP23246 707 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMC5-203ENST00000475540 HDAC1Q13547 482 aaPredicted RBP7.39□□□□□ -1.23
SMC5-203ENST00000475540 SEC23BQ15437 767 aa7.39□□□□□ -1.23
SMC5-203ENST00000475540 STK33Q9BYT3 514 aa7.39□□□□□ -1.23
SMC5-203ENST00000475540 PNMA6EA0A0J9YXQ4 647 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 TP73O15350 636 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 GLP2RO95838 553 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 MATN1P21941 496 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 CSHL1Q14406 222 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 KPNB1Q14974 876 aaKnown RBP7.38□□□□□ -1.23
SMC5-203ENST00000475540 ACSM6Q6P461 480 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 PIK3AP1Q6ZUJ8 805 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 NOL8Q76FK4 1167 aaKnown RBP7.38□□□□□ -1.23
SMC5-203ENST00000475540 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.38□□□□□ -1.23
SMC5-203ENST00000475540 MUL1Q969V5 352 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 RNF26Q9BY78 433 aaPredicted RBP7.38□□□□□ -1.23
SMC5-203ENST00000475540 ZNF700Q9H0M5 742 aa7.38□□□□□ -1.23
SMC5-203ENST00000475540 TUBA8Q9NY65 449 aaPredicted RBP7.38□□□□□ -1.23
SMC5-203ENST00000475540 J3KTA2 159 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 NTSR2O95665 410 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 TECP42680 631 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 KLF9Q13886 244 aaPredicted RBP7.37□□□□□ -1.23
SMC5-203ENST00000475540 ELF2Q15723 593 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 SYCP2LQ5T4T6 812 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 ZNF425Q6IV72 752 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 KRT27Q7Z3Y8 459 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 C1QL2Q7Z5L3 287 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 OR52L2PQ8NGH6 319 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 AKAP1Q92667 903 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMC5-203ENST00000475540 CHST12Q9NRB3 414 aa7.37□□□□□ -1.23
SMC5-203ENST00000475540 CCDC187A0A096LP49 1063 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 E5RJQ4 531 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 CTIFO43310 598 aaKnown RBP7.36□□□□□ -1.23
SMC5-203ENST00000475540 CD63P08962 238 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 ALADP13716 330 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 VPS41P49754 854 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 HSF1Q00613 529 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 ETFDHQ16134 617 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 PXDC1Q5TGL8 231 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 C11orf87Q6NUJ2 197 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 SKAP1Q86WV1 359 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 EPS8L2Q9H6S3 715 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 FBXO28Q9NVF7 368 aa7.36□□□□□ -1.23
SMC5-203ENST00000475540 SIRT4Q9Y6E7 314 aaPredicted RBP7.36□□□□□ -1.23
SMC5-203ENST00000475540 PIP5K1BO14986 540 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 NPC1O15118 1278 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 USP12O75317 370 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 PPM1AP35813 382 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 YPEL5P62699 121 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 CBFBQ13951 182 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 STARD3Q14849 445 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 IPO4Q8TEX9 1081 aaKnown RBP7.35□□□□□ -1.23
SMC5-203ENST00000475540 GLMPQ8WWB7 406 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 C18orf8Q96DM3 657 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 TMEM41AQ96HV5 264 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 SIGLEC11Q96RL6 698 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 SENP7Q9BQF6 1050 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 VPS16Q9H269 839 aa7.35□□□□□ -1.23
SMC5-203ENST00000475540 INPPL1O15357 1258 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 HOXD12P35452 270 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 ZNF91Q05481 1191 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 STIM1Q13586 685 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 Q4G0T1 1027 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 MSANTD2Q6P1R3 559 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 UEVLDQ8IX04 471 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 ASNSD1Q9NWL6 643 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 TRNAU1APQ9NX07 287 aaKnown RBP7.34□□□□□ -1.23
SMC5-203ENST00000475540 CDC23Q9UJX2 597 aa7.34□□□□□ -1.23
SMC5-203ENST00000475540 MAGED2Q9UNF1 606 aaPredicted RBP7.34□□□□□ -1.23
SMC5-203ENST00000475540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.33□□□□□ -1.24
SMC5-203ENST00000475540 C16orf96A6NNT2 1141 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 PPEF2O14830 753 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 DHHO43323 396 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 MOSPD3O75425 235 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 TAF5LO75529 589 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 TOP3BO95985 862 aaKnown RBP7.33□□□□□ -1.24
SMC5-203ENST00000475540 ANXA6P08133 673 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 PTGER1P34995 402 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 PLCD1P51178 756 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 ALDH18A1P54886 795 aaKnown RBP7.33□□□□□ -1.24
SMC5-203ENST00000475540 RPS13P62277 151 aaKnown RBP7.33□□□□□ -1.24
SMC5-203ENST00000475540 GAB1Q13480 694 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 XRRA1Q6P2D8 792 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 KYAT3Q6YP21 454 aaKnown RBP7.33□□□□□ -1.24
SMC5-203ENST00000475540 UBE2Q1Q7Z7E8 422 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 MORC1Q86VD1 984 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 NANOGP1Q8N7R0 232 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 PIGOQ8TEQ8 1089 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 WDR60Q8WVS4 1066 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 PIGKQ92643 395 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 P2RY11Q96G91 374 aa7.33□□□□□ -1.24
SMC5-203ENST00000475540 FCRL5Q96RD9 977 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms