RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ISCUQ9H1K1 167 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 SLITRK6Q9H5Y7 841 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 TRPC7Q9HCX4 862 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 TLR8Q9NR97 1041 aaKnown RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 SMPD4Q9NXE4 827 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 EHD2Q9NZN4 543 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ARHGAP26Q9UNA1 814 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 NAALADL1Q9UQQ1 740 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 PCDHGA2Q9Y5H1 932 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 BZW2Q9Y6E2 419 aaKnown RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 ZFP37Q9Y6Q3 630 aaPredicted RBP7.31□□□□□ -1.24
LIMD1-204ENST00000474665 NUMBLQ9Y6R0 609 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 DOCK4Q8N1I0 1966 aa7.31□□□□□ -1.24
LIMD1-204ENST00000474665 GON4LQ3T8J9 2241 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 TRAV19A0A0A6YYK7 116 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SSU72P8A0A1W2PR75 194 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 OTOL1A6NHN0 477 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SHISA7A6NL88 538 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 HEPACAM2A8MVW5 462 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 TMCO5BA8MYB1 307 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 GOLGA8SH3BPF8 625 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 I6L893 689 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ARNTLO00327 626 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SCAMP3O14828 347 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ATMINO43313 823 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 MSI1O43347 362 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 LAMTOR5O43504 91 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 FTLP02792 175 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 TCF3P15923 654 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 PFKLP17858 780 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 RRM1P23921 792 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SCNN1AP37088 669 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 PSEN1P49768 467 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 GSCP56915 257 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 RPL7AP62424 266 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 YWHAZP63104 245 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 OGDHQ02218 1023 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 C1QBPQ07021 282 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 FCHO2Q0JRZ9 810 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 USP4Q13107 963 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ZNF268Q14587 947 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 MTF1Q14872 753 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ZNF77Q15935 545 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ARHGAP15Q53QZ3 475 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 TDRD12Q587J7 1177 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 C10orf120Q5SQS8 335 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ARTNQ5T4W7 220 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 IL31Q6EBC2 164 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 OR6B2Q6IFH4 312 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 PLEKHA7Q6IQ23 1121 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 C19orf48Q6RUI8 117 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 TSSK4Q6SA08 328 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 RAD9BQ6WBX8 426 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 BEND5Q7L4P6 421 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 BNIPLQ7Z465 357 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 CNGA4Q8IV77 575 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 FMNL3Q8IVF7 1028 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 DEFB106AQ8N104 65 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SLC44A3Q8N4M1 653 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 EMC1Q8N766 993 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 JOSD2Q8TAC2 188 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ADAM32Q8TC27 787 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 DQX1Q8TE96 717 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SH3RF2Q8TEC5 729 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 NT5C3BQ969T7 300 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ELSPBP1Q96BH3 223 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ACSF2Q96CM8 615 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 CHFRQ96EP1 664 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 NOX5Q96PH1 765 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 PANX2Q96RD6 677 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 TRIM7Q9C029 511 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 PDCL3Q9H2J4 239 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 LINC00597Q9H2U6 94 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 NHEJ1Q9H9Q4 299 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SEMA4GQ9NTN9 838 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SPTLC3Q9NUV7 552 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 TDP1Q9NUW8 608 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SEPT11Q9NVA2 429 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SPATA6Q9NWH7 488 aaPredicted RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ASNSD1Q9NWL6 643 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 ADAM22Q9P0K1 906 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 MARCH2Q9P0N8 246 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SFMBT1Q9UHJ3 866 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 REXO2Q9Y3B8 237 aaKnown RBP7.3□□□□□ -1.24
LIMD1-204ENST00000474665 CPQQ9Y646 472 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 IGF2RP11717 2491 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 MIA3Q5JRA6 1907 aa7.3□□□□□ -1.24
LIMD1-204ENST00000474665 SDK1Q7Z5N4 2213 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 HELZ2Q9BYK8 2649 aaKnown RBP7.29□□□□□ -1.24
LIMD1-204ENST00000474665 SOWAHDA6NJG2 315 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 C2CD4BA6NLJ0 364 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 LEFTY2O00292 366 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 TM4SF5O14894 197 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 LILRB5O75023 590 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 HSF2BPO75031 334 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 RTN2O75298 545 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 ECI2O75521 394 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 DAB1O75553 588 aa7.29□□□□□ -1.24
LIMD1-204ENST00000474665 STC2O76061 302 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms