RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 APLP1P51693 650 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 NFE2Q16621 373 aaPredicted RBP22.52■■□□□ 1.2
CCM2-206ENST00000474617 UBAP2Q5T6F2 1119 aaKnown RBP22.52■■□□□ 1.2
CCM2-206ENST00000474617 ANKRD22Q5VYY1 191 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 TTC19Q6DKK2 380 aaPredicted RBP22.52■■□□□ 1.2
CCM2-206ENST00000474617 SLC7A14Q8TBB6 771 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 APBB2Q92870 758 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 CHMP6Q96FZ7 201 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 SGSM3Q96HU1 749 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 ADAM33Q9BZ11 813 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 NSRP1Q9H0G5 558 aaKnown RBP22.52■■□□□ 1.2
CCM2-206ENST00000474617 EIF2B3Q9NR50 452 aaKnown RBP22.52■■□□□ 1.2
CCM2-206ENST00000474617 ETNK2Q9NVF9 386 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 DTLQ9NZJ0 730 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 PRDM4Q9UKN5 801 aa22.52■■□□□ 1.2
CCM2-206ENST00000474617 YJEFN3A6XGL0 299 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 E7ENQ6 273 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 HOXA2O43364 376 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 TMEM63AO94886 807 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 OAZ2O95190 189 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 NCAM1P13591 858 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 GOT1P17174 413 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 GRK4P32298 578 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 NDUFV1P49821 464 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 DPYSQ14117 519 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 KCNT2Q6UVM3 1135 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 CCDC13Q8IYE1 715 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 ZNF473Q8WTR7 871 aaKnown RBP22.52■■□□□ 1.19
CCM2-206ENST00000474617 ATXN2LQ8WWM7 1075 aaKnown RBP22.52■■□□□ 1.19
CCM2-206ENST00000474617 HTR3CQ8WXA8 447 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 MAML1Q92585 1016 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 CYTH2Q99418 400 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 PAAF1Q9BRP4 392 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 OXCT2Q9BYC2 517 aaPredicted RBP22.52■■□□□ 1.19
CCM2-206ENST00000474617 PPANQ9NQ55 473 aaKnown RBP22.52■■□□□ 1.19
CCM2-206ENST00000474617 NKIRAS1Q9NYS0 192 aa22.52■■□□□ 1.19
CCM2-206ENST00000474617 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.52■■□□□ 1.19
CCM2-206ENST00000474617 EEF2KO00418 725 aaKnown RBP22.51■■□□□ 1.19
CCM2-206ENST00000474617 TRDMT1O14717 391 aaKnown RBP22.51■■□□□ 1.19
CCM2-206ENST00000474617 NRP1O14786 923 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 PARNO95453 639 aaKnown RBP22.51■■□□□ 1.19
CCM2-206ENST00000474617 FYNP06241 537 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 MLNP12872 115 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 STX2P32856 288 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 CXCR3P49682 368 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 GBE1Q04446 702 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 SEMA5AQ13591 1074 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 RFX8Q6ZV50 586 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 LRRC8DQ7L1W4 858 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 SPATA2LQ8IUW3 424 aaPredicted RBP22.51■■□□□ 1.19
CCM2-206ENST00000474617 FBXO36Q8NEA4 188 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 FAM193BQ96PV7 902 aaPredicted RBP22.51■■□□□ 1.19
CCM2-206ENST00000474617 EPAS1Q99814 870 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCM2-206ENST00000474617 TRPV6Q9H1D0 765 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 WDR6Q9NNW5 1121 aaKnown RBP22.51■■□□□ 1.19
CCM2-206ENST00000474617 PIGVQ9NUD9 493 aa22.51■■□□□ 1.19
CCM2-206ENST00000474617 A0A0A0MRY4 1105 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 PITPNM1O00562 1244 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 USP17L7P0C7H9 530 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 BRAFP15056 766 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 MX2P20592 715 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 SERPINB6P35237 376 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 BRCC3P46736 316 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 CCT5P48643 541 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 ATXN1P54253 815 aaKnown RBP22.5■■□□□ 1.19
CCM2-206ENST00000474617 ZNF33AQ06730 810 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 SEMA3BQ13214 749 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 NME3Q13232 169 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 PRKD1Q15139 912 aaPredicted RBP22.5■■□□□ 1.19
CCM2-206ENST00000474617 BRMS1LQ5PSV4 323 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 FNBP1LQ5T0N5 605 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 SYPL2Q5VXT5 272 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 VSTM1Q6UX27 236 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 C3orf62Q6ZUJ4 267 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 COLGALT2Q8IYK4 626 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 ALKBH8Q96BT7 664 aaKnown RBP22.5■■□□□ 1.19
CCM2-206ENST00000474617 SPATA13Q96N96 652 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 KCNK16Q96T55 309 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 DHRS4Q9BTZ2 278 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 COLEC11Q9BWP8 271 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 ABCC13Q9NSE7 274 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 RSPH14Q9UHP6 348 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 TEX264Q9Y6I9 313 aa22.5■■□□□ 1.19
CCM2-206ENST00000474617 RASA4BC9J798 803 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 DNM1LO00429 736 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 PRPF4O43172 522 aaKnown RBP eCLIP22.49■■□□□ 1.19
CCM2-206ENST00000474617 RASA4O43374 803 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 SMARCB1Q12824 385 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 FASTKD3Q14CZ7 662 aaKnown RBP22.49■■□□□ 1.19
CCM2-206ENST00000474617 BBS9Q3SYG4 887 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 YTHDF3Q7Z739 585 aaKnown RBP22.49■■□□□ 1.19
CCM2-206ENST00000474617 TRABD2AQ86V40 505 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 CCNJLQ8IV13 435 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 ARHGAP18Q8N392 663 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 OSBPL7Q9BZF2 842 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 OSBPL2Q9H1P3 480 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 C10orf88Q9H8K7 445 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 DDIT4Q9NX09 232 aa22.49■■□□□ 1.19
CCM2-206ENST00000474617 CACNG4Q9UBN1 327 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms