RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 MFAP3P55082 362 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 ZNF445P59923 1031 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 TRIP4Q15650 581 aaPredicted RBP21.29■■□□□ 1
PDLIM4-206ENST00000474421 CNGA2Q16280 664 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 PKDCCQ504Y2 493 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 BSPRYQ5W0U4 402 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 LYSMD4Q5XG99 296 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 BHLHA9Q7RTU4 235 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 SYT12Q8IV01 421 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 FMNL3Q8IVF7 1028 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 FAM217AQ8IXS0 508 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 ACOX2Q99424 681 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 CTNND2Q9UQB3 1225 aa21.29■■□□□ 1
PDLIM4-206ENST00000474421 FGFR1OPO95684 399 aaKnown RBP21.28■■□□□ 1
PDLIM4-206ENST00000474421 BMP6P22004 513 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 GCNT1Q02742 428 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 LMAN2Q12907 356 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 PAK1Q13153 545 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 STARD3Q14849 445 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 ANKS1BQ7Z6G8 1248 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 DDI1Q8WTU0 396 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 NDRG1Q92597 394 aaKnown RBP21.28■■□□□ 1
PDLIM4-206ENST00000474421 NUSAP1Q9BXS6 441 aaKnown RBP21.28■■□□□ 1
PDLIM4-206ENST00000474421 TMEM9BQ9NQ34 198 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 CACNA2D2Q9NY47 1150 aa21.28■■□□□ 1
PDLIM4-206ENST00000474421 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.28■■□□□ 1
PDLIM4-206ENST00000474421 YJEFN3A6XGL0 299 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 C4orf47A7E2U8 309 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 E7ENQ6 273 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 LATS1O95835 1130 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 LCP1P13796 627 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 NDUFV2P19404 249 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 PTGER3P43115 390 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 MARSP56192 900 aaKnown RBP21.27■■□□□ 1
PDLIM4-206ENST00000474421 DAOAP59103 153 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 RPL6Q02878 288 aaKnown RBP21.27■■□□□ 1
PDLIM4-206ENST00000474421 EIF4HQ15056 248 aaKnown RBP21.27■■□□□ 1
PDLIM4-206ENST00000474421 ARMCX6Q7L4S7 300 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 RABEPKQ7Z6M1 372 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 TRIM59Q8IWR1 403 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 FRMD1Q8N878 549 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 LMO3Q8TAP4 145 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 SLC35F5Q8WV83 523 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 IRGQQ8WZA9 623 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 TFAP2BQ92481 460 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 GOLGA1Q92805 767 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 HSFY1Q96LI6 401 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 CD248Q9HCU0 757 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.27■■□□□ 1
PDLIM4-206ENST00000474421 STON1Q9Y6Q2 735 aa21.27■■□□□ 1
PDLIM4-206ENST00000474421 ACACBO00763 2458 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 M0QYV0 167 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 BIN1O00499 593 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 TIMM44O43615 452 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 KCNH2Q12809 1159 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 MPPE1Q53F39 396 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 TRIM61Q5EBN2 209 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 KIAA1211LQ6NV74 962 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 TRIML1Q8N9V2 468 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 RBBP8NLQ8NC74 664 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 EHBP1Q8NDI1 1231 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 CEP76Q8TAP6 659 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 EDEM1Q92611 657 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 PIWIL1Q96J94 861 aaKnown RBP21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 THAP10Q9P2Z0 257 aaPredicted RBP21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 PILRBQ9UKJ0 227 aa21.26■□□□□ 0.99
PDLIM4-206ENST00000474421 IGHV1OR15-9A0A0B4J2B8 117 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 PATE3B3GLJ2 98 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 GADD45BO75293 160 aaPredicted RBP21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 FBXO21O94952 628 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 AFPP02771 609 aaKnown RBP21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 IRX4P78413 519 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 GEN1Q17RS7 908 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 ADGRF1Q5T601 910 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 PEAR1Q5VY43 1037 aaPredicted RBP21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 PMF1Q6P1K2 205 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 MSANTD2Q6P1R3 559 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 RRAGAQ7L523 313 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 P2RY11Q96G91 374 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 MRGPRX1Q96LB2 322 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 SRRTQ9BXP5 876 aaKnown RBP21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 IRX2Q9BZI1 471 aaPredicted RBP21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 ELOVL2Q9NXB9 296 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 SFMBT1Q9UHJ3 866 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 STOML2Q9UJZ1 356 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 RAD54BQ9Y620 910 aa21.25■□□□□ 0.99
PDLIM4-206ENST00000474421 RNF225M0QZC1 329 aaPredicted RBP21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 SYNCRIPO60506 623 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 KCNK5O95279 499 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 BRD2P25440 801 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 RGS7P49802 495 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 STX17P56962 302 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 ARID5AQ03989 594 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 ENPP2Q13822 863 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 SLC23A3Q6PIS1 610 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 METTL3Q86U44 580 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 UNC45BQ8IWX7 931 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 KAT5Q92993 513 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 CYP8B1Q9UNU6 501 aa21.24■□□□□ 0.99
PDLIM4-206ENST00000474421 WASH3PC4AMC7 463 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms