RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 PLA2G4AP47712 749 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 KIF11P52732 1056 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 IL9RQ01113 521 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 CUL4BQ13620 913 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 PTPRNQ16849 979 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 KNOP1Q1ED39 458 aaKnown RBP13.26□□□□□ -0.29
TRAF4-209ENST00000473421 PRAMEF14Q5SWL7 426 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 ZC3H3Q8IXZ2 948 aaKnown RBP13.26□□□□□ -0.29
TRAF4-209ENST00000473421 NDRG1Q92597 394 aaKnown RBP13.26□□□□□ -0.29
TRAF4-209ENST00000473421 ORAI3Q9BRQ5 295 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 ELOVL2Q9NXB9 296 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 DNMT3LQ9UJW3 386 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 NAGPAQ9UK23 515 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
TRAF4-209ENST00000473421 AGO1Q9UL18 857 aaKnown RBP13.26□□□□□ -0.29
TRAF4-209ENST00000473421 NFE2L3Q9Y4A8 694 aa13.26□□□□□ -0.29
TRAF4-209ENST00000473421 C1QL1O75973 258 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 ASS1P00966 412 aaKnown RBP13.25□□□□□ -0.29
TRAF4-209ENST00000473421 ITPKBP27987 946 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 CORO1AP31146 461 aaKnown RBP13.25□□□□□ -0.29
TRAF4-209ENST00000473421 EFEMP1Q12805 493 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 STARD3Q14849 445 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 ZACNQ401N2 412 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 KLHDC10Q6PID8 442 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 DHRS13Q6UX07 377 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 UNC13DQ70J99 1090 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 SV2AQ7L0J3 742 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 DENND1CQ8IV53 801 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 KIAA0895Q8NCT3 520 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 CYB5D2Q8WUJ1 264 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 SNX19Q92543 992 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 PRCCQ92733 491 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-209ENST00000473421 CYFIP2Q96F07 1278 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 NUP58Q9BVL2 599 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 MTG2Q9H4K7 406 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 DKK4Q9UBT3 224 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 RASAL2Q9UJF2 1139 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 USP3Q9Y6I4 520 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 KALRNO60229 2985 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 SHROOM3Q8TF72 1996 aa13.25□□□□□ -0.29
TRAF4-209ENST00000473421 KNTC1P50748 2209 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 FLNBO75369 2602 aaKnown RBP13.24□□□□□ -0.29
TRAF4-209ENST00000473421 A0A087WV48 116 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 H0Y8X5 98 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 SPTLC2O15270 562 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 KLRC4O43908 158 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 CER1O95813 267 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 HLA-DRAP01903 254 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 EPHX1P07099 455 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 AFMP43652 599 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 STK4Q13043 487 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 PPP1R26Q5T8A7 1209 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-209ENST00000473421 BIRC7Q96CA5 298 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 CIPCQ9C0C6 399 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 TM9SF3Q9HD45 589 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 ANKRD6Q9Y2G4 727 aa13.24□□□□□ -0.29
TRAF4-209ENST00000473421 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-209ENST00000473421 MUC22E2RYF6 1773 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-209ENST00000473421 UBE4BO95155 1302 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 TULP2O00295 520 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 POLR2DO15514 142 aaKnown RBP13.23□□□□□ -0.29
TRAF4-209ENST00000473421 FLRT2O43155 660 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 SYNCRIPO60506 623 aaKnown RBP13.23□□□□□ -0.29
TRAF4-209ENST00000473421 TSPAN3O60637 253 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 KIF20AO95235 890 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 CD58P19256 250 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 SGSHP51688 502 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 SNRPFP62306 86 aaKnown RBP13.23□□□□□ -0.29
TRAF4-209ENST00000473421 INCA1Q0VD86 236 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 CAMK2GQ13555 558 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-209ENST00000473421 STK38Q15208 465 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 SMAD1Q15797 465 aaKnown RBP13.23□□□□□ -0.29
TRAF4-209ENST00000473421 SGSM1Q2NKQ1 1148 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 BHLHA9Q7RTU4 235 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 CCDC186Q7Z3E2 898 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 UNC93AQ86WB7 457 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 DCBLD2Q96PD2 775 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 TMEM245Q9H330 911 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 KCTD10Q9H3F6 313 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 EBF2Q9HAK2 575 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 PCDHGB2Q9Y5G2 931 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 RAI2Q9Y5P3 530 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 PLXNA2O75051 1894 aa13.23□□□□□ -0.29
TRAF4-209ENST00000473421 CYSRT1A8MQ03 144 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 PLK4O00444 970 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 WNT9AO14904 365 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 PDCP20941 246 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 HOXD9P28356 352 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-209ENST00000473421 HLA-FP30511 346 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 OXTRP30559 389 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 AFF3P51826 1226 aaKnown RBP13.22□□□□□ -0.29
TRAF4-209ENST00000473421 PPP3CAQ08209 521 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 GOLGA8FQ08AF8 430 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 GOLGA8DPQ0D2H9 430 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 FOXD4L6Q3SYB3 417 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-209ENST00000473421 ZNF394Q53GI3 561 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 FOXD4L5Q5VV16 416 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-209ENST00000473421 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
TRAF4-209ENST00000473421 SERPINA13PQ6UXR4 307 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms