RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 MSANTD3Q96H12 275 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 HSH2DQ96JZ2 352 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 FAM81BQ96LP2 452 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 CCDC42Q96M95 316 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 STK33Q9BYT3 514 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 NIF3L1Q9GZT8 377 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ASB7Q9H672 318 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 NHEJ1Q9H9Q4 299 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 PLEKHA5Q9HAU0 1116 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 APOBEC3GQ9HC16 384 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 TRMT1Q9NXH9 659 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 AIPL1Q9NZN9 384 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 CNTN3Q9P232 1028 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 TUBGCP4Q9UGJ1 667 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 DMGDHQ9UI17 866 aaKnown RBP6.75□□□□□ -1.33
HDAC1-205ENST00000472928 SIX4Q9UIU6 781 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 ITGA11Q9UKX5 1188 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 PPP2R2CQ9Y2T4 447 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 DERAQ9Y315 318 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 C2CD2Q9Y426 696 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 PCDHGA5Q9Y5G8 931 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 UNC79Q9P2D8 2635 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 HECTD1Q9ULT8 2610 aa6.75□□□□□ -1.33
HDAC1-205ENST00000472928 URB1O60287 2271 aaKnown RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SSU72P8A0A1W2PR75 194 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SLC38A8A6NNN8 435 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 TTLL8A6PVC2 850 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 C4orf47A7E2U8 309 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 HEPACAM2A8MVW5 462 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SPECC1L-ADORA2AF8WAN1 911 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 ZNF197O14709 1029 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 ZSCAN12O43309 604 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 XPOTO43592 962 aaKnown RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 AKR1B10O60218 316 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 RPP40O75818 363 aaKnown RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 ABLIM3O94929 683 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SEC24AO95486 1093 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 LRG1P02750 347 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 THP07101 528 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 GJA1P17302 382 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 TBXAS1P24557 533 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 PXNP49023 591 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 PDE6CP51160 858 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 EPHA5P54756 1037 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 GCNT1Q02742 428 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 FCHO2Q0JRZ9 810 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 CUL2Q13617 745 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 PLK5Q496M5 336 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 DGKKQ5KSL6 1271 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 HGSNATQ68CP4 663 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SCARA3Q6AZY7 606 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SLC8B1Q6J4K2 584 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 KIAA1328Q86T90 577 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 VPS36Q86VN1 386 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 NT5DC4Q86YG4 428 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 C3orf58Q8NDZ4 430 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 BEST2Q8NFU1 509 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 ZSCAN18Q8TBC5 510 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SHC3Q92529 594 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 C18orf25Q96B23 403 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 ZC3H10Q96K80 434 aaKnown RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 C16orf45Q96MC5 204 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 ZMAT2Q96NC0 199 aaKnown RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 LRRC3BQ96PB8 259 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 EDEM2Q9BV94 578 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SCNM1Q9BWG6 230 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 HAUS4Q9H6D7 363 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 C8orf33Q9H7E9 229 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 VPS45Q9NRW7 570 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 SEPT11Q9NVA2 429 aaKnown RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 DPP3Q9NY33 737 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 REXO2Q9Y3B8 237 aaKnown RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 R3HCC1Q9Y3T6 440 aaKnown RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 NUB1Q9Y5A7 615 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 INSL5Q9Y5Q6 135 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 EPN1Q9Y6I3 576 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-205ENST00000472928 EML5Q05BV3 1969 aa6.74□□□□□ -1.33
HDAC1-205ENST00000472928 PI4KAP42356 2102 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 UQCRHLA0A096LP55 91 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 CCDC163A0A0D9SF12 145 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 A0A0U1RQJ8 604 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 EIF3CLB5ME19 914 aaKnown RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 I3L4J1 428 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 FOXN3O00409 490 aaPredicted RBP6.73□□□□□ -1.33
HDAC1-205ENST00000472928 PRRG1O14668 218 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 PPEF2O14830 753 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 CHADO15335 359 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 CYP26A1O43174 497 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 B3GAT3O94766 335 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 UQCRHP07919 91 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 CCDC172P0C7W6 258 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 P4HA1P13674 534 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ATF2P15336 505 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 PCSK2P16519 638 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 RHOQP17081 205 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 CD58P19256 250 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ANXA13P27216 316 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 PRKCIP41743 596 aa6.73□□□□□ -1.33
HDAC1-205ENST00000472928 ASPAP45381 313 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms