RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SYT12Q8IV01 421 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 SLC35F5Q8WV83 523 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 NELFBQ8WX92 580 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 PIWIL1Q96J94 861 aaKnown RBP16■□□□□ 0.15
VTI1A-203ENST00000472892 CNTNAP3BQ96NU0 1288 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
VTI1A-203ENST00000472892 ZSWIM1Q9BR11 485 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 CNTNAP3Q9BZ76 1288 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 CNGB3Q9NQW8 809 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 TMEM74BQ9NUR3 256 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 CALCOCO1Q9P1Z2 691 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 EVLQ9UI08 416 aaPredicted RBP16■□□□□ 0.15
VTI1A-203ENST00000472892 PCDHB4Q9Y5E5 795 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 THADAQ6YHU6 1953 aa16■□□□□ 0.15
VTI1A-203ENST00000472892 WASH3PC4AMC7 463 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 CDX4O14627 284 aaPredicted RBP15.99■□□□□ 0.15
VTI1A-203ENST00000472892 GADD45BO75293 160 aaPredicted RBP15.99■□□□□ 0.15
VTI1A-203ENST00000472892 ZNF217O75362 1048 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 KCNK5O95279 499 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 CYBBP04839 570 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 NDUFV2P19404 249 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 DPP6P42658 865 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 ENPP2Q13822 863 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 GEN1Q17RS7 908 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 N4BP2L1Q5TBK1 243 aaPredicted RBP15.99■□□□□ 0.15
VTI1A-203ENST00000472892 PEAR1Q5VY43 1037 aaPredicted RBP15.99■□□□□ 0.15
VTI1A-203ENST00000472892 KLHL10Q6JEL2 608 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 FMNL3Q8IVF7 1028 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 SIX6OS1Q8N1H7 587 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 PPM1KQ8N3J5 372 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 EHBP1Q8NDI1 1231 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 RNF139Q8WU17 664 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 SLC2A11Q9BYW1 496 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 ABCC13Q9NSE7 274 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 CACNA2D2Q9NY47 1150 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 THAP10Q9P2Z0 257 aaPredicted RBP15.99■□□□□ 0.15
VTI1A-203ENST00000472892 STOML2Q9UJZ1 356 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 PILRBQ9UKJ0 227 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 CLEC4EQ9ULY5 219 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 HBS1LQ9Y450 684 aaKnown RBP15.99■□□□□ 0.15
VTI1A-203ENST00000472892 RAD54BQ9Y620 910 aa15.99■□□□□ 0.15
VTI1A-203ENST00000472892 IGHV1OR15-9A0A0B4J2B8 117 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 NPC1O15118 1278 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 AP5Z1O43299 807 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 GNA14O95837 355 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 HARS2P49590 506 aaKnown RBP15.98■□□□□ 0.15
VTI1A-203ENST00000472892 ZNF132P52740 706 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 MARSP56192 900 aaKnown RBP15.98■□□□□ 0.15
VTI1A-203ENST00000472892 DAOAP59103 153 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 GCNT1Q02742 428 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 RPL6Q02878 288 aaKnown RBP15.98■□□□□ 0.15
VTI1A-203ENST00000472892 STILQ15468 1287 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 DAB2IPQ5VWQ8 1189 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 LYSMD4Q5XG99 296 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 PMF1Q6P1K2 205 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 ARMCX6Q7L4S7 300 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 TRIM59Q8IWR1 403 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 RBBP8NLQ8NC74 664 aaPredicted RBP15.98■□□□□ 0.15
VTI1A-203ENST00000472892 DDI1Q8WTU0 396 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 EDEM1Q92611 657 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 NUP205Q92621 2012 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 KAT5Q92993 513 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 MRGPRX1Q96LB2 322 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 TMEM9BQ9NQ34 198 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 SFMBT1Q9UHJ3 866 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.98■□□□□ 0.15
VTI1A-203ENST00000472892 STON1Q9Y6Q2 735 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 PLXND1Q9Y4D7 1925 aa15.98■□□□□ 0.15
VTI1A-203ENST00000472892 BIN1O00499 593 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 TIMM44O43615 452 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 LCP1P13796 627 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 ITPKAP23677 461 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 HOXD12P35452 270 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 KCNH2Q12809 1159 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 LMAN2Q12907 356 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 MPPE1Q53F39 396 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 TRIM61Q5EBN2 209 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 SLC23A3Q6PIS1 610 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 RRAGAQ7L523 313 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 METTL3Q86U44 580 aaKnown RBP15.97■□□□□ 0.15
VTI1A-203ENST00000472892 UCMAQ8WVF2 138 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 IRGQQ8WZA9 623 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 HSFY1Q96LI6 401 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 ELOVL2Q9NXB9 296 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 CTNND2Q9UQB3 1225 aa15.97■□□□□ 0.15
VTI1A-203ENST00000472892 CNOT1A5YKK6 2376 aaKnown RBP15.97■□□□□ 0.15
VTI1A-203ENST00000472892 LATS1O95835 1130 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 BRD2P25440 801 aaKnown RBP15.96■□□□□ 0.15
VTI1A-203ENST00000472892 PMLP29590 882 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 IL12RB1P42701 662 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 RGS7P49802 495 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 STX17P56962 302 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 ZNF445P59923 1031 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 ZNF33AQ06730 810 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 PAK1Q13153 545 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 EIF4HQ15056 248 aaKnown RBP15.96■□□□□ 0.15
VTI1A-203ENST00000472892 E2F5Q15329 346 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 FUT11Q495W5 492 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 ADGRF1Q5T601 910 aa15.96■□□□□ 0.15
VTI1A-203ENST00000472892 MSANTD2Q6P1R3 559 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms