RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SLC2A3P11169 496 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 STIP1P31948 543 aaKnown RBP15.16■□□□□ 0.02
HIF3A-206ENST00000472815 CCR1P32246 355 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 ADCY8P40145 1251 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 MTA1Q13330 715 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 NOMO1Q15155 1222 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 OASLQ15646 514 aaKnown RBP15.16■□□□□ 0.02
HIF3A-206ENST00000472815 CA9Q16790 459 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 CEP128Q6ZU80 1094 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 PDZD4Q76G19 769 aaPredicted RBP15.16■□□□□ 0.02
HIF3A-206ENST00000472815 TADA2BQ86TJ2 420 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 GSPT2Q8IYD1 628 aaKnown RBP15.16■□□□□ 0.02
HIF3A-206ENST00000472815 VPS52Q8N1B4 723 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 ALLCQ8N6M5 410 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 PDZD8Q8NEN9 1154 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 KCTD15Q96SI1 283 aaPredicted RBP15.16■□□□□ 0.02
HIF3A-206ENST00000472815 EPAS1Q99814 870 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 FERMT1Q9BQL6 677 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 VN1R3Q9BXE9 311 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 FUT8Q9BYC5 575 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 WDR6Q9NNW5 1121 aaKnown RBP15.16■□□□□ 0.02
HIF3A-206ENST00000472815 CALCOCO1Q9P1Z2 691 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 SLC27A5Q9Y2P5 690 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 SNX24Q9Y343 169 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 RWDD3Q9Y3V2 267 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 GREB1Q4ZG55 1949 aa15.16■□□□□ 0.02
HIF3A-206ENST00000472815 A0A1W2PQH9 124 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 IRAK2O43187 625 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 KRT14P02533 472 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 RBP3P10745 1247 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 IL4RP24394 825 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 ELF1P32519 619 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 HTR7P34969 479 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 ACTN2P35609 894 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 HCAR3P49019 387 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 PITX1P78337 314 aaPredicted RBP15.15■□□□□ 0.02
HIF3A-206ENST00000472815 MTMR3Q13615 1198 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 TMEM240Q5SV17 173 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 C16orf59Q7L2K0 433 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 TAC4Q86UU9 113 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 PLD5Q8N7P1 536 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 PCDH19Q8TAB3 1148 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 ADAM32Q8TC27 787 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 OVCA2Q8WZ82 227 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 HERVK_113Q902F9 699 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 CSPG4P5Q96PW8 444 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 RAD9AQ99638 391 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 FAM118BQ9BPY3 351 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 CLSTN3Q9BQT9 956 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 FNIP2Q9P278 1114 aa15.15■□□□□ 0.02
HIF3A-206ENST00000472815 EEF2KO00418 725 aaKnown RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 MAP2K7O14733 419 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 ABLIM3O94929 683 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 IGLV3-25P01717 112 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 CSH1P0DML2 217 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 CSH2P0DML3 217 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 RPL21P46778 160 aaKnown RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 ALDH1A3P47895 512 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 GPR15P49685 360 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 PLTPP55058 493 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 XRCC4Q13426 336 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 PPP2R5DQ14738 602 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 VEPH1Q14D04 833 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 TAF12Q16514 161 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 ACBD5Q5T8D3 534 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 SDHAF4Q5VUM1 108 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 MSANTD2Q6P1R3 559 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 DARS2Q6PI48 645 aaKnown RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 DDX42Q86XP3 938 aaKnown RBP eCLIP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 MREGQ8N565 214 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 TTC9BQ8N6N2 239 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 CLP1Q92989 425 aaKnown RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 TKTL2Q9H0I9 626 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 PCDH9Q9HC56 1237 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 MTMR10Q9NXD2 777 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 CWC15Q9P013 229 aaKnown RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 H7C0C1 242 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 CREB3O43889 395 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 FGF18O76093 207 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 GOT1P17174 413 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 RPL17P18621 184 aaKnown RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 ATP5OP48047 213 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 KPNA1P52294 538 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 TPI1P60174 286 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 RAB33AQ14088 237 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 PCGF5Q86SE9 256 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 SCD5Q86SK9 330 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 HERC6Q8IVU3 1022 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 CDKL3Q8IVW4 592 aaPredicted RBP15.14■□□□□ 0.01
HIF3A-206ENST00000472815 PQLC3Q8N755 202 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 HAPLN3Q96S86 360 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 RUFY1Q96T51 708 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 TMEM121Q9BTD3 319 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 TTLL2Q9BWV7 592 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 GMIPQ9P107 970 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 SLC12A6Q9UHW9 1150 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 HEY1Q9Y5J3 304 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 RAD54BQ9Y620 910 aa15.14■□□□□ 0.01
HIF3A-206ENST00000472815 SLC38A8A6NNN8 435 aa15.13■□□□□ 0.01
HIF3A-206ENST00000472815 TLL1O43897 1013 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms