RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 KLF16Q9BXK1 252 aaPredicted RBP17.54■□□□□ 0.4
CCM2-205ENST00000472223 THG1LQ9NWX6 298 aaKnown RBP17.54■□□□□ 0.4
CCM2-205ENST00000472223 PYCARDQ9ULZ3 195 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 DUSP10Q9Y6W6 482 aa17.54■□□□□ 0.4
CCM2-205ENST00000472223 KIF5CO60282 957 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 ENDOD1O94919 500 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 PPP2R5DQ14738 602 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 SMAD2Q15796 467 aaKnown RBP17.53■□□□□ 0.4
CCM2-205ENST00000472223 ZFYVE27Q5T4F4 411 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 ACBD5Q5T8D3 534 aaPredicted RBP17.53■□□□□ 0.4
CCM2-205ENST00000472223 YAF2Q8IY57 180 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 CCAR2Q8N163 923 aaKnown RBP17.53■□□□□ 0.4
CCM2-205ENST00000472223 TPCN2Q8NHX9 752 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 CENPIQ92674 756 aaPredicted RBP17.53■□□□□ 0.4
CCM2-205ENST00000472223 ZSWIM3Q96MP5 696 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 ASB16Q96NS5 453 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 SLC22A12Q96S37 553 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 DDX50Q9BQ39 737 aaKnown RBP17.53■□□□□ 0.4
CCM2-205ENST00000472223 GKN1Q9NS71 199 aa17.53■□□□□ 0.4
CCM2-205ENST00000472223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.53■□□□□ 0.4
CCM2-205ENST00000472223 BRWD1Q9NSI6 2320 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 LEFTY2O00292 366 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 SLC9A3R1O14745 358 aaPredicted RBP17.52■□□□□ 0.4
CCM2-205ENST00000472223 MSI1O43347 362 aaKnown RBP17.52■□□□□ 0.4
CCM2-205ENST00000472223 MOCS3O95396 460 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 IGLV3-25P01717 112 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 PCK1P35558 622 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 AIF1P55008 147 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 OGDHQ02218 1023 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 FAM78AQ5JUQ0 283 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 TRNP1Q6NT89 227 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 C11orf63Q6NUN7 778 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 TRIM58Q8NG06 486 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 SH3RF2Q8TEC5 729 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 RPGRIP1Q96KN7 1286 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 MYADMQ96S97 322 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 TRIM7Q9C029 511 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 OBP2AQ9NY56 170 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 CFAP97Q9P2B7 532 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 TBC1D14Q9P2M4 693 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 TRIM10Q9UDY6 481 aa17.52■□□□□ 0.4
CCM2-205ENST00000472223 E2F8A0AVK6 867 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 BUB1BO60566 1050 aaPredicted RBP17.51■□□□□ 0.39
CCM2-205ENST00000472223 KRT7P08729 469 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 DEKP35659 375 aaKnown RBP17.51■□□□□ 0.39
CCM2-205ENST00000472223 CXCR3P49682 368 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 BOLA3Q53S33 107 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 ZC3H12AQ5D1E8 599 aaKnown RBP17.51■□□□□ 0.39
CCM2-205ENST00000472223 EFHC2Q5JST6 749 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 SLFN11Q7Z7L1 901 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 FAM131BQ86XD5 332 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 KIAA1958Q8N8K9 716 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 NUP210Q8TEM1 1887 aaPredicted RBP17.51■□□□□ 0.39
CCM2-205ENST00000472223 USP13Q92995 863 aaPredicted RBP17.51■□□□□ 0.39
CCM2-205ENST00000472223 BTN2A3PQ96KV6 586 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 TKTL2Q9H0I9 626 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 SMG9Q9H0W8 520 aaKnown RBP17.51■□□□□ 0.39
CCM2-205ENST00000472223 TRPV4Q9HBA0 871 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 PIGVQ9NUD9 493 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 EPS15L1Q9UBC2 864 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 PCSK1NQ9UHG2 260 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 AMFRQ9UKV5 643 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 ZKSCAN5Q9Y2L8 839 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 ALG6Q9Y672 507 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 REV3LO60673 3130 aa17.51■□□□□ 0.39
CCM2-205ENST00000472223 DENND4AQ7Z401 1863 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 PALMO75781 387 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 STC2O76061 302 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 MOCS2O96007 188 aaPredicted RBP17.5■□□□□ 0.39
CCM2-205ENST00000472223 TCF3P15923 654 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 TFE3P19532 575 aaPredicted RBP17.5■□□□□ 0.39
CCM2-205ENST00000472223 SP100P23497 879 aaPredicted RBP17.5■□□□□ 0.39
CCM2-205ENST00000472223 MIPP30301 263 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 CORO1AP31146 461 aaKnown RBP17.5■□□□□ 0.39
CCM2-205ENST00000472223 HDAC4P56524 1084 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 PITX1P78337 314 aaPredicted RBP17.5■□□□□ 0.39
CCM2-205ENST00000472223 TFF2Q03403 129 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 SH3PXD2AQ5TCZ1 1133 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 PEX26Q7Z412 305 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 REXO1L1PQ8IX06 675 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 BPIFB1Q8TDL5 484 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 NXPE3Q969Y0 559 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 AZIN2Q96A70 460 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 ELSPBP1Q96BH3 223 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 SALL4Q9UJQ4 1053 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 USP18Q9UMW8 372 aa17.5■□□□□ 0.39
CCM2-205ENST00000472223 HELZP42694 1942 aaKnown RBP17.5■□□□□ 0.39
CCM2-205ENST00000472223 TYW5A2RUC4 315 aaKnown RBP17.49■□□□□ 0.39
CCM2-205ENST00000472223 HEPACAM2A8MVW5 462 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 KCNU1A8MYU2 1149 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 NRG2O14511 850 aaPredicted RBP17.49■□□□□ 0.39
CCM2-205ENST00000472223 LRCH4O75427 683 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 LATS1O95835 1130 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 TNNT1P13805 278 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 COMTP21964 271 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 CHKAP35790 457 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 VIPR2P41587 438 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 IFNAR2P48551 515 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 KCNQ1P51787 676 aa17.49■□□□□ 0.39
CCM2-205ENST00000472223 ZNF252P-AS1Q0IIN9 211 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms