RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ZBTB26Q9HCK0 441 aa5.5□□□□□ -1.53
CD46-213ENST00000471987 PNPLA8Q9NP80 782 aa5.5□□□□□ -1.53
CD46-213ENST00000471987 SLC22A23A1A5C7 686 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 C16orf96A6NNT2 1141 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 F8W810 466 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 SLC3A2P08195 630 aaKnown RBP5.49□□□□□ -1.53
CD46-213ENST00000471987 PBX1P40424 430 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 MTA1Q13330 715 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 ACRBPQ8NEB7 543 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 SENP7Q9BQF6 1050 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 MLXIPLQ9NP71 852 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 PRDM11Q9NQV5 511 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 VPS4AQ9UN37 437 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 SNX13Q9Y5W8 968 aa5.49□□□□□ -1.53
CD46-213ENST00000471987 SMAD6O43541 496 aaKnown RBP5.48□□□□□ -1.53
CD46-213ENST00000471987 TLX3O43711 291 aaPredicted RBP5.48□□□□□ -1.53
CD46-213ENST00000471987 CCNT2O60583 730 aaKnown RBP5.48□□□□□ -1.53
CD46-213ENST00000471987 SYF2O95926 243 aaKnown RBP5.48□□□□□ -1.53
CD46-213ENST00000471987 TFEBP19484 476 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 TNFRSF1BP20333 461 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 MATN1P21941 496 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 ATICP31939 592 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 ALDH7A1P49419 539 aaKnown RBP5.48□□□□□ -1.53
CD46-213ENST00000471987 VPS41P49754 854 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 GPS1Q13098 491 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 ERV3-1Q14264 604 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 ZNF549Q6P9A3 640 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 SLC44A5Q8NCS7 719 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 PHKBQ93100 1093 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 SLC25A28Q96A46 364 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 THOC3Q96J01 351 aaKnown RBP5.48□□□□□ -1.53
CD46-213ENST00000471987 WDR24Q96S15 920 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 HIPK2Q9H2X6 1198 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 TMEM8AQ9HCN3 771 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 PAPOLBQ9NRJ5 636 aaKnown RBP5.48□□□□□ -1.53
CD46-213ENST00000471987 DECR2Q9NUI1 292 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 ASNSD1Q9NWL6 643 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 TMOD4Q9NZQ9 345 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 PCDHB2Q9Y5E7 798 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 PCDHGB6Q9Y5F9 930 aa5.48□□□□□ -1.53
CD46-213ENST00000471987 CBFA2T3O75081 653 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 COQ9O75208 318 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 IL18RAPO95256 599 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 ST6GAL1P15907 406 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 HOXD12P35452 270 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 IDUAP35475 653 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 DAG1Q14118 895 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 RRAGBQ5VZM2 374 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 ABLIM2Q6H8Q1 611 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 KRT78Q8N1N4 520 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 PELI3Q8N2H9 469 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 AKAP1Q92667 903 aaKnown RBP eCLIP5.47□□□□□ -1.53
CD46-213ENST00000471987 KRTAP2-2Q9BYT5 123 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 MLXIPQ9HAP2 919 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 RXFP3Q9NSD7 469 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 OBP2AQ9NY56 170 aa5.47□□□□□ -1.53
CD46-213ENST00000471987 ZNF814B7Z6K7 855 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 PRYO14603 147 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 AREL1O15033 823 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 CTIFO43310 598 aaKnown RBP5.46□□□□□ -1.54
CD46-213ENST00000471987 FGF2P09038 288 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 ARP10275 920 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 DRD1P21728 446 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 MMP8P22894 467 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 IGHMBP2P38935 993 aaKnown RBP5.46□□□□□ -1.54
CD46-213ENST00000471987 CDKN2AP42771 156 aaKnown RBP5.46□□□□□ -1.54
CD46-213ENST00000471987 BFSP2Q13515 415 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 FAXCQ5TGI0 409 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 FAM90A2PQ658T7 463 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 ADGRF4Q8IZF3 695 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 CELF1Q92879 486 aaKnown RBP5.46□□□□□ -1.54
CD46-213ENST00000471987 TTLL2Q9BWV7 592 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 GATA5Q9BWX5 397 aaPredicted RBP5.46□□□□□ -1.54
CD46-213ENST00000471987 AS3MTQ9HBK9 375 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 MOV10Q9HCE1 1003 aaKnown RBP5.46□□□□□ -1.54
CD46-213ENST00000471987 MSRB1Q9NZV6 116 aa5.46□□□□□ -1.54
CD46-213ENST00000471987 A0A087WZ62 844 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 TRBV5-3A0A0A0MS03 114 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 CLCA1A8K7I4 914 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 RHPN2P1A8MT19 583 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 PRPF4O43172 522 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD46-213ENST00000471987 ZC3H11AO75152 810 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD46-213ENST00000471987 NDUFB8O95169 186 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 T-ENOLP0DO92 83 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 NDUFS1P28331 727 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 GALEQ14376 348 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 PRTGQ2VWP7 1150 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 CYB5RLQ6IPT4 315 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 MRNIPQ6NTE8 343 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 TLDC1Q6P9B6 456 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 USP17L6PQ6QN14 398 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 CRTC1Q6UUV9 634 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 RFX8Q6ZV50 586 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 B4GALNT4Q76KP1 1039 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 ATP11CQ8NB49 1132 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 OVCA2Q8WZ82 227 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 KAT2BQ92831 832 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 CAMK1GQ96NX5 476 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 APOL5Q9BWW9 433 aa5.45□□□□□ -1.54
CD46-213ENST00000471987 AGO2Q9UKV8 859 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms