RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 MFAP3P55082 362 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 CETN1Q12798 172 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 TRIM61Q5EBN2 209 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 TTI2Q6NXR4 508 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 CPXM2Q8N436 756 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 DEFB119Q8N690 84 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 RNF139Q8WU17 664 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 NELFBQ8WX92 580 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 KCTD13Q8WZ19 329 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 EDEM1Q92611 657 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 PCDHB4Q9Y5E5 795 aa23.58■■□□□ 1.37
C9orf3-213ENST00000471978 YJEFN3A6XGL0 299 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 E7ENQ6 273 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 LCP1P13796 627 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 ITPKAP23677 461 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 DPP6P42658 865 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 HARS2P49590 506 aaKnown RBP23.57■■□□□ 1.36
C9orf3-213ENST00000471978 TRIP4Q15650 581 aaPredicted RBP23.57■■□□□ 1.36
C9orf3-213ENST00000471978 GEN1Q17RS7 908 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 PKDCCQ504Y2 493 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 BSPRYQ5W0U4 402 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 LCLAT1Q6UWP7 414 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 PPM1KQ8N3J5 372 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 DDI1Q8WTU0 396 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 TFAP2BQ92481 460 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 NUSAP1Q9BXS6 441 aaKnown RBP23.57■■□□□ 1.36
C9orf3-213ENST00000471978 CNGB3Q9NQW8 809 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 CYP8B1Q9UNU6 501 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 CTNND2Q9UQB3 1225 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 STON1Q9Y6Q2 735 aa23.57■■□□□ 1.36
C9orf3-213ENST00000471978 ATXN2Q99700 1313 aaKnown RBP23.57■■□□□ 1.36
C9orf3-213ENST00000471978 IGHV1OR15-9A0A0B4J2B8 117 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 BICDL2A1A5D9 508 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 CDX4O14627 284 aaPredicted RBP23.56■■□□□ 1.36
C9orf3-213ENST00000471978 LMAN2Q12907 356 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 MORC3Q14149 939 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 PSAPL1Q6NUJ1 521 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 FAM217AQ8IXS0 508 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 KAT5Q92993 513 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 PIWIL1Q96J94 861 aaKnown RBP23.56■■□□□ 1.36
C9orf3-213ENST00000471978 MRGPRX1Q96LB2 322 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 SLC6A17Q9H1V8 727 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 ABCC13Q9NSE7 274 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 SFMBT1Q9UHJ3 866 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 PILRBQ9UKJ0 227 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 CLEC4EQ9ULY5 219 aa23.56■■□□□ 1.36
C9orf3-213ENST00000471978 HBS1LQ9Y450 684 aaKnown RBP23.56■■□□□ 1.36
C9orf3-213ENST00000471978 TNRC6BQ9UPQ9 1833 aaKnown RBP23.56■■□□□ 1.36
C9orf3-213ENST00000471978 CEP295Q9C0D2 2601 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 GON4LQ3T8J9 2241 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 RNF225M0QZC1 329 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-213ENST00000471978 BIN1O00499 593 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 NPC1O15118 1278 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 P4HA2O15460 535 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 GADD45BO75293 160 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-213ENST00000471978 RGS7P49802 495 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 STARD3Q14849 445 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 FOXR2Q6PJQ5 311 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 ANKS1BQ7Z6G8 1248 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 SCML4Q8N228 414 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 LMO3Q8TAP4 145 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 UCMAQ8WVF2 138 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 SLC2A11Q9BYW1 496 aa23.55■■□□□ 1.36
C9orf3-213ENST00000471978 THAP10Q9P2Z0 257 aaPredicted RBP23.55■■□□□ 1.36
C9orf3-213ENST00000471978 HOXD12P35452 270 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 NOVA1P51513 510 aaKnown RBP23.54■■□□□ 1.36
C9orf3-213ENST00000471978 DAOAP59103 153 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 ZNF33AQ06730 810 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 CNGA2Q16280 664 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 MPPE1Q53F39 396 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 PEAR1Q5VY43 1037 aaPredicted RBP23.54■■□□□ 1.36
C9orf3-213ENST00000471978 PMF1Q6P1K2 205 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 SLC23A3Q6PIS1 610 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 KIAA1324Q6UXG2 1013 aaKnown RBP23.54■■□□□ 1.36
C9orf3-213ENST00000471978 RRAGAQ7L523 313 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 SLC35F5Q8WV83 523 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 ZSWIM1Q9BR11 485 aa23.54■■□□□ 1.36
C9orf3-213ENST00000471978 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.54■■□□□ 1.36
C9orf3-213ENST00000471978 M0QYV0 167 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 PIK3R2O00459 728 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 TSPAN3O60637 253 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 CFIP05156 583 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 BRD2P25440 801 aaKnown RBP23.53■■□□□ 1.36
C9orf3-213ENST00000471978 PMLP29590 882 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 IL12RB1P42701 662 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 STX17P56962 302 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 STILQ15468 1287 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 UAP1L1Q3KQV9 507 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 FUT11Q495W5 492 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 RBBP8NLQ8NC74 664 aaPredicted RBP23.53■■□□□ 1.36
C9orf3-213ENST00000471978 EHBP1Q8NDI1 1231 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 CD93Q9NPY3 652 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 ELOVL2Q9NXB9 296 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 ANGPTL2Q9UKU9 493 aa23.53■■□□□ 1.36
C9orf3-213ENST00000471978 MSI1O43347 362 aaKnown RBP23.52■■□□□ 1.36
C9orf3-213ENST00000471978 GABBR2O75899 941 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 GNA14O95837 355 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 CALCAP01258 141 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 ENGP17813 658 aa23.52■■□□□ 1.36
C9orf3-213ENST00000471978 MAPK8P45983 427 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms