RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 PPP1R21Q6ZMI0 780 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 ARHGEF18Q6ZSZ5 1173 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 ZNF534Q76KX8 674 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 Q7L0L9 218 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 RPAINQ86UA6 219 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 PIGZQ86VD9 579 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 ZC3H18Q86VM9 953 aaKnown RBP6.66□□□□□ -1.34
SPEN-204ENST00000471538 PSTKQ8IV42 348 aaKnown RBP6.66□□□□□ -1.34
SPEN-204ENST00000471538 CNPY4Q8N129 248 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 CCDC185Q8N715 623 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 ANKRD42Q8N9B4 389 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 MGARPQ8TDB4 240 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.66□□□□□ -1.34
SPEN-204ENST00000471538 FBF1Q8TES7 1133 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 PYROXD1Q8WU10 500 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 DCAKDQ8WVC6 231 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 KCTD13Q8WZ19 329 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 WNT8BQ93098 351 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 TNIP3Q96KP6 325 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 OLFM3Q96PB7 478 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 QKIQ96PU8 341 aaKnown RBP eCLIP6.66□□□□□ -1.345e-16■■■■■ 46.9
SPEN-204ENST00000471538 CSPG4P5Q96PW8 444 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 ELAC2Q9BQ52 826 aaKnown RBP6.66□□□□□ -1.34
SPEN-204ENST00000471538 COL25A1Q9BXS0 654 aaPredicted RBP6.66□□□□□ -1.34
SPEN-204ENST00000471538 DUSP16Q9BY84 665 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 NSRP1Q9H0G5 558 aaKnown RBP6.66□□□□□ -1.34
SPEN-204ENST00000471538 SNX25Q9H3E2 840 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 ACTR5Q9H9F9 607 aaPredicted RBP6.66□□□□□ -1.34
SPEN-204ENST00000471538 VPS37BQ9H9H4 285 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 KIF9Q9HAQ2 790 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 PNPLA8Q9NP80 782 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 KCNK9Q9NPC2 374 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 WDR70Q9NW82 654 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.66□□□□□ -1.34
SPEN-204ENST00000471538 PRKAG3Q9UGI9 489 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 SMG5Q9UPR3 1016 aaKnown RBP6.66□□□□□ -1.34
SPEN-204ENST00000471538 PCDHB3Q9Y5E6 796 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 TRPV2Q9Y5S1 764 aa6.66□□□□□ -1.34
SPEN-204ENST00000471538 A0A1W2PPM1 405 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 MEIS3P2A8K0S8 358 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 H7C0C1 242 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 TNPO2O14787 897 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 KCNN4O15554 427 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 KPNA6O60684 536 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 HUS1O60921 280 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 ATP2C2O75185 946 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 GCATO75600 419 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 DGKIO75912 1065 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 BEST1O76090 585 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 VIMP08670 466 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 CYBAP13498 195 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 CCL5P13501 91 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 LCP1P13796 627 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 ZFXP17010 805 aaPredicted RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 NPR3P17342 541 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 DESP17661 470 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 PTPN1P18031 435 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 TPSB2P20231 275 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 RDXP35241 583 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 ELK3P41970 407 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 ATP5OP48047 213 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 GJA8P48165 433 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 NR2C2P49116 596 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 YWHAZP63104 245 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 BASP1P80723 227 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 MRPS5P82675 430 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 GBE1Q04446 702 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 TPSAB1Q15661 275 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 SLC25A52Q3SY17 297 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 BBS9Q3SYG4 887 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 SLC45A4Q5BKX6 768 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 EFHC1Q5JVL4 640 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 RNF187Q5TA31 235 aaPredicted RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 NCBP2-AS2Q69YL0 99 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 GDF6Q6KF10 455 aaPredicted RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 BLOC1S3Q6QNY0 202 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 C4orf22Q6V702 233 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 CAPN12Q6ZSI9 719 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 CLEC20AQ6ZU45 233 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 C3orf62Q6ZUJ4 267 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 CCDC121Q6ZUS5 278 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 SH2D5Q6ZV89 423 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 MRPL10Q7Z7H8 261 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 TAX1BP1Q86VP1 789 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 CAND1Q86VP6 1230 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 CDKL3Q8IVW4 592 aaPredicted RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 DEFB106AQ8N104 65 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 PDIK1LQ8N165 341 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 MICALL1Q8N3F8 863 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 ZNF276Q8N554 614 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 TAB3Q8N5C8 712 aaPredicted RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 MCUQ8NE86 351 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 GDAP1Q8TB36 358 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 DYDC1Q8WWB3 177 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 ZFP42Q96MM3 310 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 SLC2A13Q96QE2 648 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 TGS1Q96RS0 853 aaKnown RBP6.65□□□□□ -1.35
SPEN-204ENST00000471538 NPY6RQ99463 290 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 PAFAH2Q99487 392 aa6.65□□□□□ -1.35
SPEN-204ENST00000471538 MTG1Q9BT17 334 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms