RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 DPY19L2P1Q6NXN4 242 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 TOGARAM2Q6ZUX3 1019 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 TMEM110Q86TL2 294 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 SLC47A2Q86VL8 602 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 FAM71AQ8IYT1 594 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 CPXM2Q8N436 756 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 ZNF513Q8N8E2 541 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-218ENST00000470942 DDI1Q8WTU0 396 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 GAB3Q8WWW8 586 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 PDCL3Q9H2J4 239 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 TMEM63CQ9P1W3 806 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 PCDHGC3Q9UN70 934 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 NAALADL1Q9UQQ1 740 aa16.37■□□□□ 0.21
HDAC6-218ENST00000470942 GPR179Q6PRD1 2367 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 PAPSS1O43252 624 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-218ENST00000470942 RPP40O75818 363 aaKnown RBP16.36■□□□□ 0.21
HDAC6-218ENST00000470942 PENKP01210 267 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-218ENST00000470942 FYNP06241 537 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 CISD3P0C7P0 127 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 UCHL3P15374 230 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 TBX4P57082 545 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 TYRO3Q06418 890 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 CRY1Q16526 586 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 LAIR1Q6GTX8 287 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 ANO7Q6IWH7 933 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 TMEM92Q6UXU6 159 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 TRMT11Q7Z4G4 463 aaKnown RBP16.36■□□□□ 0.21
HDAC6-218ENST00000470942 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-218ENST00000470942 UNC45BQ8IWX7 931 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 KIAA2013Q8IYS2 634 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 WDTC1Q8N5D0 677 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 KCNV2Q8TDN2 545 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 DQX1Q8TE96 717 aaKnown RBP16.36■□□□□ 0.21
HDAC6-218ENST00000470942 P2RY11Q96G91 374 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 PPP1R13BQ96KQ4 1090 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 NOX5Q96PH1 765 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 TRIM62Q9BVG3 475 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 POLMQ9NP87 494 aaPredicted RBP16.36■□□□□ 0.21
HDAC6-218ENST00000470942 TJP2Q9UDY2 1190 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 EBF1Q9UH73 591 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 CEP83Q9Y592 693 aa16.36■□□□□ 0.21
HDAC6-218ENST00000470942 CFAP54Q96N23 3096 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 PRRT4C9JH25 899 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 ALDH1A2O94788 518 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 LATS1O95835 1130 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 WASP42768 502 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 COPB1P53618 953 aaKnown RBP16.35■□□□□ 0.21
HDAC6-218ENST00000470942 MPPE1Q53F39 396 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 ADGRF1Q5T601 910 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 NUGGCQ68CJ6 796 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 OR6B2Q6IFH4 312 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 SDE2Q6IQ49 451 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 CAVIN1Q6NZI2 390 aaKnown RBP16.35■□□□□ 0.21
HDAC6-218ENST00000470942 FAM217AQ8IXS0 508 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 C1orf131Q8NDD1 294 aaKnown RBP16.35■□□□□ 0.21
HDAC6-218ENST00000470942 ADAM32Q8TC27 787 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 PCMTD1Q96MG8 357 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-218ENST00000470942 SERPINB11Q96P15 392 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 CPXM1Q96SM3 734 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 NAA15Q9BXJ9 866 aaKnown RBP16.35■□□□□ 0.21
HDAC6-218ENST00000470942 STK33Q9BYT3 514 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 TPSD1Q9BZJ3 242 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 LHX5Q9H2C1 402 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 SYNCQ9H7C4 482 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 POPDC2Q9HBU9 364 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 PLCB1Q9NQ66 1216 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 FBXO10Q9UK96 956 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 STARD13Q9Y3M8 1113 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 SDK1Q7Z5N4 2213 aa16.35■□□□□ 0.21
HDAC6-218ENST00000470942 ADAM23O75077 832 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 CHRM1P11229 460 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-218ENST00000470942 HNRNPLP14866 589 aaKnown RBP eCLIP16.34■□□□□ 0.21
HDAC6-218ENST00000470942 NTSR1P30989 418 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 SLC11A2P49281 568 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 KLK7P49862 253 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 SNX16P57768 344 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 YWHAZP63104 245 aaKnown RBP16.34■□□□□ 0.21
HDAC6-218ENST00000470942 RING1Q06587 406 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 TAF3Q5VWG9 929 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 SYPL2Q5VXT5 272 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 EGFLAMQ63HQ2 1017 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 CACNA2D4Q7Z3S7 1137 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 PGBD3Q8N328 593 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 AOPEPQ8N6M6 819 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 TMA16Q96EY4 203 aaKnown RBP16.34■□□□□ 0.21
HDAC6-218ENST00000470942 NAT10Q9H0A0 1025 aaKnown RBP16.34■□□□□ 0.21
HDAC6-218ENST00000470942 FAM207AQ9NSI2 230 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-218ENST00000470942 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
HDAC6-218ENST00000470942 LIMA1Q9UHB6 759 aaKnown RBP16.34■□□□□ 0.21
HDAC6-218ENST00000470942 HCN2Q9UL51 889 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 SLC27A6Q9Y2P4 619 aa16.34■□□□□ 0.21
HDAC6-218ENST00000470942 SPTBN4Q9H254 2564 aa16.33■□□□□ 0.21
HDAC6-218ENST00000470942 GOLGA6L7A0A1B0GV03 622 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 TCRBV21S2A2A0A5A6 115 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 ACSL4O60488 711 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 IGLV3-27P01718 113 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 RETP07949 1114 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 HOXB2P14652 356 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 CYP11B1P15538 503 aa16.33■□□□□ 0.2
HDAC6-218ENST00000470942 ZNF445P59923 1031 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms