RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 SLC26A6Q9BXS9 759 aa4.58□□□□□ -1.68
PRPF3-204ENST00000470824 ABHD16BQ9H3Z7 469 aa4.58□□□□□ -1.68
PRPF3-204ENST00000470824 KCNK9Q9NPC2 374 aa4.58□□□□□ -1.68
PRPF3-204ENST00000470824 SNX15Q9NRS6 342 aa4.58□□□□□ -1.68
PRPF3-204ENST00000470824 TMEM98Q9Y2Y6 226 aa4.58□□□□□ -1.68
PRPF3-204ENST00000470824 FER1L4A9Z1Z3 1794 aa4.58□□□□□ -1.68
PRPF3-204ENST00000470824 MAST3O60307 1309 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CCDC187A0A096LP49 1063 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CCDC151A5D8V7 595 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 FAM90A20PA6NIJ5 464 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 SAC3D1A6NKF1 404 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 NKX2-8O15522 239 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CA12O43570 354 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 URI1O94763 535 aaPredicted RBP4.57□□□□□ -1.68
PRPF3-204ENST00000470824 TTLL1O95922 423 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 MYCLP12524 364 aaPredicted RBP4.57□□□□□ -1.68
PRPF3-204ENST00000470824 ALADP13716 330 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 NDUFB7P17568 137 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CTGFP29279 349 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 ELF1P32519 619 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CYP2C18P33260 490 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 TXNL4AP83876 142 aaKnown RBP4.57□□□□□ -1.68
PRPF3-204ENST00000470824 TAP1Q03518 808 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 RNASELQ05823 741 aaKnown RBP4.57□□□□□ -1.68
PRPF3-204ENST00000470824 DEUP1Q05D60 604 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CCDC15Q0P6D6 951 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 EFEMP1Q12805 493 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 SPATS1Q496A3 300 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CTXN3Q4LDR2 81 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 ACSM6Q6P461 480 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 BBS12Q6ZW61 710 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 RSRC2Q7L4I2 434 aaKnown RBP4.57□□□□□ -1.68
PRPF3-204ENST00000470824 RASGRP2Q7LDG7 609 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 MAATS1Q7Z4T9 603 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 FAM71DQ8N9W8 422 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 FSIP1Q8NA03 581 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 HVCN1Q96D96 273 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CINPQ9BW66 212 aaPredicted RBP4.57□□□□□ -1.68
PRPF3-204ENST00000470824 CYP4F11Q9HBI6 524 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 UBN1Q9NPG3 1134 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 SERTAD4Q9NUC0 356 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 TMEM160Q9NX00 188 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 ASAP1Q9ULH1 1129 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 DNAJC16Q9Y2G8 782 aa4.57□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3DA0A087WVF3 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3IA0A087WXS9 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3EA0A087X179 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3KA0A087X1G2 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3BA6NDS4 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3FA6NER0 549 aaPredicted RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 MBD3L5A6NJ08 208 aaPredicted RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 A6NLC8 198 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3LB9A6J9 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 STX16-NPEPL1H3BU86 382 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 M0QYT0 321 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 M0QZQ0 153 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 QSOX1O00391 747 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 STX16O14662 325 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 HNRNPRO43390 633 aaKnown RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 ORC4O43929 436 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TSPAN3O60637 253 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 NPSP0C0P6 89 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 FAM163BP0C2L3 166 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3HP0C7X1 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TMIGD3P0DMS9 266 aaPredicted RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 ENGP17813 658 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TNFAIP3P21580 790 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 GRK5P34947 590 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 KRT9P35527 623 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 IGHMBP2P38935 993 aaKnown RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 GRIA3P42263 894 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 AVPR1BP47901 424 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 PCP4P48539 62 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 CCR5P51681 352 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 GEMIN4P57678 1058 aaKnown RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 RPL15P61313 204 aaKnown RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 MRPS35P82673 323 aaKnown RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 PDCLQ13371 301 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 DCTN1Q14203 1278 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 FAM187BQ17R55 369 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 LSM12Q3MHD2 195 aaKnown RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 MIIPQ5JXC2 388 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 WDR78Q5VTH9 848 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3GQ6DHY5 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3CQ6IPX1 549 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 ANKRD16Q6P6B7 361 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 SFTPA1Q8IWL2 248 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 TBC1D3Q8IZP1 549 aaPredicted RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 SLC44A3Q8N4M1 653 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 OR52L2PQ8NGH6 319 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 SH3RF3Q8TEJ3 882 aaPredicted RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 NPIPB3Q92617 1050 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 HTRA1Q92743 480 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 CAVIN3Q969G5 261 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 KTI12Q96EK9 354 aaPredicted RBP4.56□□□□□ -1.68
PRPF3-204ENST00000470824 COQ10AQ96MF6 247 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 PIGSQ96S52 555 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 REEP2Q9BRK0 252 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 JMJD4Q9H9V9 463 aa4.56□□□□□ -1.68
PRPF3-204ENST00000470824 SAP30LQ9HAJ7 183 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms