RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TSC22D3Q99576 134 aa9.77□□□□□ -0.85
TOP3A-203ENST00000469739 APOL2Q9BQE5 337 aa9.77□□□□□ -0.85
TOP3A-203ENST00000469739 MECRQ9BV79 373 aa9.77□□□□□ -0.85
TOP3A-203ENST00000469739 ZNF395Q9H8N7 513 aaPredicted RBP9.77□□□□□ -0.85
TOP3A-203ENST00000469739 SHOC2Q9UQ13 582 aa9.77□□□□□ -0.85
TOP3A-203ENST00000469739 A0A0G2JND7 137 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 CYB561D2O14569 222 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 TNPO2O14787 897 aaKnown RBP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 CAPN9O14815 690 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 SUN1O94901 812 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 PYGBP11216 843 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 RNASELQ05823 741 aaKnown RBP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 PTK7Q13308 1070 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 LAMB3Q13751 1172 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 NOMO1Q15155 1222 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 MROH9Q5TGP6 573 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 IQSEC1Q6DN90 963 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 HACE1Q8IYU2 909 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 FNIP1Q8TF40 1166 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 PSMC3IPQ9P2W1 217 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 MARCOQ9UEW3 520 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 PHTF1Q9UMS5 762 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 PRRC2BQ5JSZ5 2229 aaKnown RBP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 A6NHS1 94 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 M0QYT0 321 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 MT-ND3P03897 115 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 AMHP03971 560 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 INHBAP08476 426 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 KITP10721 976 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 CACNA2D1P54289 1103 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 LILRA4P59901 499 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 TFDP2Q14188 446 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 FAM110CQ1W6H9 321 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 TSNAXIP1Q2TAA8 658 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 LRRC6Q86X45 466 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 SPNS2Q8IVW8 549 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 SERAC1Q96JX3 654 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 KCTD15Q96SI1 283 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 NRDE2Q9H7Z3 1164 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 ECT2Q9H8V3 914 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 USP29Q9HBJ7 922 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 LRRC4Q9HBW1 653 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 MIOSQ9NXC5 875 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 UBP1Q9NZI7 540 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 ZFATQ9P243 1243 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 ZC3H7BQ9UGR2 993 aaKnown RBP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 UBQLN1Q9UMX0 589 aaKnown RBP9.76□□□□□ -0.85
TOP3A-203ENST00000469739 NRCAMQ92823 1304 aa9.76□□□□□ -0.85
TOP3A-203ENST00000469739 MYBPHLA2RUH7 354 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 SMIM24O75264 130 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 LUC7L3O95232 432 aaKnown RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 F2P00734 622 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 PYGLP06737 847 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 GABRB2P47870 512 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 TAF6P49848 677 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 CLCNKBP51801 687 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 PGGT1BP53609 377 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 ROR2Q01974 943 aaKnown RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 DCAF4L1Q3SXM0 396 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 DRICH1Q6PGQ1 229 aaPredicted RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 ZNF410Q86VK4 478 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 SLC7A14Q8TBB6 771 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 PTPRN2Q92932 1015 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 ERP27Q96DN0 273 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 FAM167BQ9BTA0 163 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 PCDH10Q9P2E7 1040 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 KLHL14Q9P2G3 628 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 NRP1O14786 923 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 USP17L7P0C7H9 530 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 GNAT1P11488 350 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 TARSP26639 723 aaKnown RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 SCNN1GP51170 649 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 FSCN1Q16658 493 aaKnown RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 KIAA0319Q5VV43 1072 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 KDELC2Q7Z4H8 507 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 TRIM74Q86UV6 250 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 TRIM73Q86UV7 250 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 VSIG1Q86XK7 387 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 ECHDC2Q86YB7 292 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 PDCD7Q8N8D1 485 aaKnown RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 SMG8Q8ND04 991 aaKnown RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 USP6NLQ92738 828 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 EZH1Q92800 747 aaPredicted RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 TTC25Q96NG3 672 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 ACSS2Q9NR19 701 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 KRT82Q9NSB4 513 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 TMEM30AQ9NV96 361 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 DDX43Q9NXZ2 648 aaKnown RBP9.75□□□□□ -0.85
TOP3A-203ENST00000469739 C17orf102A2RUQ5 167 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 CFAP73A6NFT4 308 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 RRN3P2A6NIE6 340 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 TRIM49D1C9J1S8 452 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 FAM72CH0Y354 149 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 GSTA1P08263 222 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 PHBP35232 272 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 PCK1P35558 622 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 BOLA3Q53S33 107 aa9.75□□□□□ -0.85
TOP3A-203ENST00000469739 UBXN11Q5T124 520 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms