RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 IRX4P78413 519 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 RPL6Q02878 288 aaKnown RBP11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 GEN1Q17RS7 908 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 FYB2Q5VWT5 728 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 ARHGEF19Q8IW93 802 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 RBBP8NLQ8NC74 664 aaPredicted RBP11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 LMO3Q8TAP4 145 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 SLC35F5Q8WV83 523 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 KCTD13Q8WZ19 329 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 PLD4Q96BZ4 506 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 TMA16Q96EY4 203 aaKnown RBP11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 ZSWIM1Q9BR11 485 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 EDEM2Q9BV94 578 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 MIS12Q9H081 205 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 SLC6A17Q9H1V8 727 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 UBE2TQ9NPD8 197 aaPredicted RBP11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 CNGB3Q9NQW8 809 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 CALCOCO1Q9P1Z2 691 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 FBXO10Q9UK96 956 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 CLEC4EQ9ULY5 219 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 STON1Q9Y6Q2 735 aa11.12□□□□□ -0.63
TGFBR3-205ENST00000468996 MSI1O43347 362 aaKnown RBP11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 GABBR2O75899 941 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 PENKP01210 267 aaPredicted RBP11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 NDUFV2P19404 249 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 ITPKAP23677 461 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 MFAP3P55082 362 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 DAOAP59103 153 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 ARID5AQ03989 594 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 TRIP4Q15650 581 aaPredicted RBP11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 UAP1L1Q3KQV9 507 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 PKDCCQ504Y2 493 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 MPPE1Q53F39 396 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 LYSMD4Q5XG99 296 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 KIAA1324Q6UXG2 1013 aaKnown RBP11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 BHLHA9Q7RTU4 235 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 SYT12Q8IV01 421 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 TRIM59Q8IWR1 403 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 SCUBE3Q8IX30 993 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 UCMAQ8WVF2 138 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 SORCS1Q8WY21 1168 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 GOLGA1Q92805 767 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 CRACR2AQ9BSW2 395 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 CIPCQ9C0C6 399 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 INTS2Q9H0H0 1204 aaKnown RBP11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 ST7Q9NRC1 585 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 TMEM74BQ9NUR3 256 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 ELOVL2Q9NXB9 296 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 KIAA1468Q9P260 1216 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 CYP8B1Q9UNU6 501 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 SLC27A6Q9Y2P4 619 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 HBS1LQ9Y450 684 aaKnown RBP11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 LAMA1P25391 3075 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 SPAG17Q6Q759 2223 aa11.11□□□□□ -0.63
TGFBR3-205ENST00000468996 LNP1A1A4G5 178 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 GFRA2O00451 464 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 TM4SF5O14894 197 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 AP5Z1O43299 807 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 SYNCRIPO60506 623 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 NDUFS2O75306 463 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 ZNF217O75362 1048 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 LETM1O95202 739 aaPredicted RBP11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 CFIP05156 583 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 ADRB1P08588 477 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 USP8P40818 1118 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 MAPK8P45983 427 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 UBE2HP62256 183 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 GCNT1Q02742 428 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 STARD3Q14849 445 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 STILQ15468 1287 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 TRIM61Q5EBN2 209 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 DAB2IPQ5VWQ8 1189 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 FOXR2Q6PJQ5 311 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 SLC36A4Q6YBV0 504 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 CPXM2Q8N436 756 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 CLEC4CQ8WTT0 213 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 MRGPRX1Q96LB2 322 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 KREMEN1Q96MU8 473 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 GABRG3Q99928 467 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 LSM14BQ9BX40 385 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 NUSAP1Q9BXS6 441 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 TMEM9BQ9NQ34 198 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 MYO16Q9Y6X6 1858 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 EML5Q05BV3 1969 aa11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 MYO18AQ92614 2054 aaKnown RBP11.1□□□□□ -0.63
TGFBR3-205ENST00000468996 ATXN2Q99700 1313 aaKnown RBP11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 GOLGA6L7A0A1B0GV03 622 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 TIMM44O43615 452 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 KCNK5O95279 499 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 LTFP02788 710 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 NCAM1P13591 858 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 IL12RB1P42701 662 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 MARSP56192 900 aaKnown RBP11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 TBX4P57082 545 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 ZNF33AQ06730 810 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 TPD52L1Q16890 204 aaPredicted RBP11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 ARHGAP44Q17R89 818 aa11.09□□□□□ -0.63
TGFBR3-205ENST00000468996 FUT11Q495W5 492 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms