RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 TMC5Q6UXY8 1006 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 TMEM184AQ6ZMB5 413 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 EFHBQ8N7U6 833 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 RAPGEF5Q92565 580 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 HSPH1Q92598 858 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 SLC22A12Q96S37 553 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 MAGEB5Q9BZ81 275 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 ATXN3LQ9H3M9 355 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 SFXN1Q9H9B4 322 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.19■□□□□ 0.5
RPL39-202ENST00000468844 GPATCH2LQ9NWQ4 482 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 CDC23Q9UJX2 597 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 TLR6Q9Y2C9 796 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 MTCH2Q9Y6C9 303 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 PI4K2BG5E9Z4 385 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 NNTQ13423 1086 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 CA9Q16790 459 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 ZFYVE27Q5T4F4 411 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 STXBP5Q5T5C0 1151 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 PDZD4Q76G19 769 aaPredicted RBP18.19■□□□□ 0.5
RPL39-202ENST00000468844 SND1Q7KZF4 910 aaKnown RBP eCLIP18.19■□□□□ 0.5
RPL39-202ENST00000468844 ANKS1BQ7Z6G8 1248 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 GRASPQ7Z6J2 395 aaPredicted RBP18.19■□□□□ 0.5
RPL39-202ENST00000468844 TADA2BQ86TJ2 420 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 CREG2Q8IUH2 290 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 CMASQ8NFW8 434 aaPredicted RBP18.19■□□□□ 0.5
RPL39-202ENST00000468844 EXD1Q8NHP7 514 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 TEKT4Q8WW24 435 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 NTAN1Q96AB6 310 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 TCEAL4Q96EI5 215 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 SLC39A13Q96H72 371 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 MS4A14Q96JA4 679 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 PBKQ96KB5 322 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 CAPZA3Q96KX2 299 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 TKTL2Q9H0I9 626 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 WDCPQ9H6R7 721 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 DDX56Q9NY93 547 aaKnown RBP18.19■□□□□ 0.5
RPL39-202ENST00000468844 FZD10Q9ULW2 581 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 AP4E1Q9UPM8 1137 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 SHROOM3Q8TF72 1996 aa18.19■□□□□ 0.5
RPL39-202ENST00000468844 CES2O00748 559 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 MOSPD3O75425 235 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 OLFM2O95897 454 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 KRT1P04264 644 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 CD48P09326 243 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 NTHL1P78549 312 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 SHKBP1Q8TBC3 707 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 MRPS31Q92665 395 aaKnown RBP18.18■□□□□ 0.5
RPL39-202ENST00000468844 RNF25Q96BH1 459 aaPredicted RBP18.18■□□□□ 0.5
RPL39-202ENST00000468844 FAM161BQ96MY7 647 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 CYP2S1Q96SQ9 504 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 NACA2Q9H009 215 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 TRPC7Q9HCX4 862 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 DZANK1Q9NVP4 752 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 DNMT3LQ9UJW3 386 aa18.18■□□□□ 0.5
RPL39-202ENST00000468844 LRRD1A4D1F6 860 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 C3orf70A6NLC5 250 aaPredicted RBP18.17■□□□□ 0.5
RPL39-202ENST00000468844 ZRANB2O95218 330 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPL39-202ENST00000468844 CCR1P32246 355 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 ADRA1BP35368 520 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 TBX4P57082 545 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 SCAPQ12770 1279 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 PPP2R5DQ14738 602 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 LLGL1Q15334 1064 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 PRSS36Q5K4E3 855 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 SMG7Q92540 1137 aaKnown RBP18.17■□□□□ 0.5
RPL39-202ENST00000468844 RNF34Q969K3 372 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 FCRL2Q96LA5 508 aaPredicted RBP18.17■□□□□ 0.5
RPL39-202ENST00000468844 L2HGDHQ9H9P8 463 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 MTMR10Q9NXD2 777 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 ARHGEF38Q9NXL2 777 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 SMARCAL1Q9NZC9 954 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 CHD5Q8TDI0 1954 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 SLC12A8A0AV02 714 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 CEP104O60308 925 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 IGLV3-27P01718 113 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 POU3F3P20264 500 aaPredicted RBP18.17■□□□□ 0.5
RPL39-202ENST00000468844 KDELR1P24390 212 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 ARSEP51690 589 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 AIF1P55008 147 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 CDH6P55285 790 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 TRIP4Q15650 581 aaPredicted RBP18.17■□□□□ 0.5
RPL39-202ENST00000468844 DPYSL2Q16555 572 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 BRMS1LQ5PSV4 323 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 MFSD7Q6UXD7 560 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 CCDC50Q8IVM0 306 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 PYROXD2Q8N2H3 581 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 RASGEF1CQ8N431 466 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 MAB21L3Q8N8X9 362 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 LEMD2Q8NC56 503 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 RBM41Q96IZ5 413 aaKnown RBP18.17■□□□□ 0.5
RPL39-202ENST00000468844 GCNAQ96QF7 691 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 HERPUD2Q9BSE4 406 aa18.17■□□□□ 0.5
RPL39-202ENST00000468844 DHX35Q9H5Z1 703 aaKnown RBP18.17■□□□□ 0.5
RPL39-202ENST00000468844 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPL39-202ENST00000468844 KCNU1A8MYU2 1149 aa18.16■□□□□ 0.5
RPL39-202ENST00000468844 ARL13BQ3SXY8 428 aa18.16■□□□□ 0.5
RPL39-202ENST00000468844 SEL1L2Q5TEA6 688 aa18.16■□□□□ 0.5
RPL39-202ENST00000468844 PSTKQ8IV42 348 aaKnown RBP18.16■□□□□ 0.5
RPL39-202ENST00000468844 ARL14EPQ8N8R7 260 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms