RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ZMYND8Q9ULU4 1186 aaPredicted RBP21.36■■□□□ 1.01
TMEM53-207ENST00000468117 DRG1Q9Y295 367 aaKnown RBP21.36■■□□□ 1.01
TMEM53-207ENST00000468117 HEY1Q9Y5J3 304 aa21.36■■□□□ 1.01
TMEM53-207ENST00000468117 CHD7Q9P2D1 2997 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 CARNS1A5YM72 827 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 FGF18O76093 207 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 ABLIM3O94929 683 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 SEC24AO95486 1093 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 ITGAVP06756 1048 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 ARL4AP40617 200 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 AIF1P55008 147 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 LMNB2Q03252 620 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 TAF10Q12962 218 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 MTERF4Q7Z6M4 381 aaKnown RBP21.35■■□□□ 1.01
TMEM53-207ENST00000468117 ALLCQ8N6M5 410 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 RNF139Q8WU17 664 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 RNF34Q969K3 372 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 FRMD8P1Q9BZ68 369 aaPredicted RBP21.35■■□□□ 1.01
TMEM53-207ENST00000468117 TKTL2Q9H0I9 626 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 SMOC2Q9H3U7 446 aa21.35■■□□□ 1.01
TMEM53-207ENST00000468117 IRAK2O43187 625 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 MSI1O43347 362 aaKnown RBP21.34■■□□□ 1.01
TMEM53-207ENST00000468117 CREB3O43889 395 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 MAP3K6O95382 1288 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 GBP1P32455 592 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 PLTPP55058 493 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 EIF3EP60228 445 aaKnown RBP21.34■■□□□ 1.01
TMEM53-207ENST00000468117 SCAPQ12770 1279 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 EIF4EBP2Q13542 120 aaPredicted RBP21.34■■□□□ 1.01
TMEM53-207ENST00000468117 NOMO1Q15155 1222 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 ARL13BQ3SXY8 428 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 HERC6Q8IVU3 1022 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 CAVIN3Q969G5 261 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 ZDHHC18Q9NUE0 388 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 MAGED2Q9UNF1 606 aaPredicted RBP21.34■■□□□ 1.01
TMEM53-207ENST00000468117 SLC4A7Q9Y6M7 1214 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 FAM72CH0Y354 149 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 SGK1O00141 431 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 MAP2K7O14733 419 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 MCF2LO15068 1137 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 KRT14P02533 472 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 ATF2P15336 505 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 AMPD1P23109 780 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 TUFMP49411 452 aaKnown RBP21.34■■□□□ 1.01
TMEM53-207ENST00000468117 FAM72AQ5TYM5 149 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 FAM72DQ6L9T8 149 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 B4GALNT4Q76KP1 1039 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 ZC3H18Q86VM9 953 aaKnown RBP21.34■■□□□ 1.01
TMEM53-207ENST00000468117 FAM72BQ86X60 149 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 FBXO25Q8TCJ0 367 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.34■■□□□ 1.01
TMEM53-207ENST00000468117 MRPL17Q9NRX2 175 aaKnown RBP21.34■■□□□ 1.01
TMEM53-207ENST00000468117 CEP290O15078 2479 aa21.34■■□□□ 1.01
TMEM53-207ENST00000468117 LCHNA4D1U4 455 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 SLC38A8A6NNN8 435 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 ATP8B1O43520 1251 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 RBP3P10745 1247 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 ETS1P14921 441 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 TGM2P21980 687 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 IVDP26440 423 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 KLRC2P26717 231 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 ZDHHC24Q6UX98 284 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 ARHGAP18Q8N392 663 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 HERVK_113Q902F9 699 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 CLP1Q92989 425 aaKnown RBP21.33■■□□□ 1.01
TMEM53-207ENST00000468117 ZBTB9Q96C00 473 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 CYP4F11Q9HBI6 524 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 ETNK2Q9NVF9 386 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 RCOR3Q9P2K3 495 aaPredicted RBP21.33■■□□□ 1.01
TMEM53-207ENST00000468117 MFHAS1Q9Y4C4 1052 aa21.33■■□□□ 1.01
TMEM53-207ENST00000468117 ZSCAN5DPP0CG00 497 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 ADCY8P40145 1251 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 GDF10P55107 478 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 RASIP1Q5U651 963 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 TPGS2Q68CL5 300 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 CCDC89Q8N998 374 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 KLHL23Q8NBE8 558 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 RAD9AQ99638 391 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 ARHGEF4Q9NR80 690 aa21.33■■□□□ 1
TMEM53-207ENST00000468117 TLR8Q9NR97 1041 aaKnown RBP21.33■■□□□ 1
TMEM53-207ENST00000468117 H3BRJ5 948 aa21.32■■□□□ 1
TMEM53-207ENST00000468117 IFNB1P01574 187 aa21.32■■□□□ 1
TMEM53-207ENST00000468117 ATP2A2P16615 1042 aaKnown RBP21.32■■□□□ 1
TMEM53-207ENST00000468117 GBE1Q04446 702 aa21.32■■□□□ 1
TMEM53-207ENST00000468117 FMO2Q99518 471 aa21.32■■□□□ 1
TMEM53-207ENST00000468117 SNX10Q9Y5X0 201 aa21.32■■□□□ 1
TMEM53-207ENST00000468117 NUP205Q92621 2012 aa21.32■■□□□ 1
TMEM53-207ENST00000468117 EEF2KO00418 725 aaKnown RBP21.31■■□□□ 1
TMEM53-207ENST00000468117 TLL1O43897 1013 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 RARGP13631 454 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 CA8P35219 290 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 GGCXP38435 758 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 SEMA3BQ13214 749 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 NNTQ13423 1086 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 RAB33AQ14088 237 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 NCBP2-AS2Q69YL0 99 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 UNC45BQ8IWX7 931 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 SNF8Q96H20 258 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 LAMA3Q16787 3333 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 TP73O15350 636 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms