RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 DNTTP04053 509 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 ITGA2BP08514 1039 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 IRF1P10914 325 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 CKMT1AP12532 417 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 NXPH1P58417 271 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 CCT2P78371 535 aaKnown RBP12.35□□□□□ -0.43
VPS26A-204ENST00000467852 KCNAB2Q13303 367 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 ZNF234Q14588 700 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 TTC31Q49AM3 519 aaPredicted RBP12.35□□□□□ -0.43
VPS26A-204ENST00000467852 MANEAQ5SRI9 462 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 SERPINA13PQ6UXR4 307 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 CCDC83Q8IWF9 413 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 PDCL2Q8N4E4 241 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 ERMNQ8TAM6 284 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 MAPK15Q8TD08 544 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 BICD1Q96G01 975 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 ZNF560Q96MR9 790 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 HAPLN2Q9GZV7 340 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 BHMT2Q9H2M3 363 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 DPP3Q9NY33 737 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 TUBD1Q9UJT1 453 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 NCKAP1Q9Y2A7 1128 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 ENTPD2Q9Y5L3 495 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 MYH11P35749 1972 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 CELSR1Q9NYQ6 3014 aa12.35□□□□□ -0.43
VPS26A-204ENST00000467852 A0A1W2PR77 199 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 COCHO43405 550 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 HUS1O60921 280 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 SDC3O75056 442 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 BDNFP23560 247 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 PRKCHP24723 683 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 RPA1P27694 616 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 PCSK1P29120 753 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 TRAPPC10P48553 1259 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 NOP14P78316 857 aaKnown RBP12.34□□□□□ -0.43
VPS26A-204ENST00000467852 ARID5AQ03989 594 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 ZBTB16Q05516 673 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 SRSF6Q13247 344 aaKnown RBP12.34□□□□□ -0.43
VPS26A-204ENST00000467852 HECTD3Q5T447 861 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 MAMDC2Q7Z304 686 aaPredicted RBP12.34□□□□□ -0.43
VPS26A-204ENST00000467852 TMEM86AQ8N2M4 240 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 FUCA2Q9BTY2 467 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 C17orf75Q9HAS0 396 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 CUEDC1Q9NWM3 386 aaPredicted RBP12.34□□□□□ -0.43
VPS26A-204ENST00000467852 KCNG1Q9UIX4 513 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 SLC27A6Q9Y2P4 619 aa12.34□□□□□ -0.43
VPS26A-204ENST00000467852 OGTO15294 1046 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 MTSS1O43312 755 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 NOBOXO60393 691 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 NEMFO60524 1076 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 MAGEC1O60732 1142 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 HIP1RO75146 1068 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 PNPLA4P41247 253 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 LHX1P48742 406 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 CYP4F2P78329 520 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 KRT32Q14532 448 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 ESPL1Q14674 2120 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 TGIF1Q15583 401 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 ADCK5Q3MIX3 580 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 C1QL3Q5VWW1 255 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 BORAQ6PGQ7 559 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 HTR3DQ70Z44 454 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 ZNF454Q8N9F8 522 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 PDZD8Q8NEN9 1154 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 OR4C6Q8NH72 309 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 GANCQ8TET4 914 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 BHMTQ93088 406 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 POM121Q96HA1 1249 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 AIFM3Q96NN9 605 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 NACA2Q9H009 215 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
VPS26A-204ENST00000467852 ANO2Q9NQ90 1003 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 FBXO10Q9UK96 956 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 SNX14Q9Y5W7 946 aa12.33□□□□□ -0.44
VPS26A-204ENST00000467852 SDK2Q58EX2 2172 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 VPS4BO75351 444 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 DDAH2O95865 285 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 CENPBP07199 599 aaPredicted RBP12.32□□□□□ -0.44
VPS26A-204ENST00000467852 XBP1P17861 261 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 MUTP22033 750 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 SLC5A2P31639 672 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 SMTNP53814 917 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 POLE2P56282 527 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 IFRD2Q12894 506 aaPredicted RBP12.32□□□□□ -0.44
VPS26A-204ENST00000467852 CAMK2GQ13555 558 aaPredicted RBP12.32□□□□□ -0.44
VPS26A-204ENST00000467852 MAPRE1Q15691 268 aaKnown RBP12.32□□□□□ -0.44
VPS26A-204ENST00000467852 GEN1Q17RS7 908 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 FAM171BQ6P995 826 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 ADGRF2Q8IZF7 708 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 WBP2Q969T9 261 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 SERAC1Q96JX3 654 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 NTPCRQ9BSD7 190 aaKnown RBP12.32□□□□□ -0.44
VPS26A-204ENST00000467852 FBRSQ9HAH7 460 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 EBF2Q9HAK2 575 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 USP29Q9HBJ7 922 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 ELOVL2Q9NXB9 296 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 PLK2Q9NYY3 685 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 DKK3Q9UBP4 350 aa12.32□□□□□ -0.44
VPS26A-204ENST00000467852 LSM7Q9UK45 103 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms