RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 IGSF9Q9P2J2 1179 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 LPAR3Q9UBY5 353 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 ZMYND8Q9ULU4 1186 aaPredicted RBP5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 SLC27A6Q9Y2P4 619 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 DTNAQ9Y4J8 743 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 LRP12Q9Y561 859 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 TTC3P53804 2025 aa5.22□□□□□ -1.57
PRPF40A-205ENST00000467114 HNRNPDLO14979 420 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 RGS10O43665 173 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 TLR2O60603 784 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 CNOT3O75175 753 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 RNF8O76064 485 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 OAZ2O95190 189 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 PRKAR1BP31321 381 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 DIO1P49895 249 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 COPB1P53618 953 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 RAB30Q15771 203 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 LEXMQ3ZCV2 418 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 MIDNQ504T8 468 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 AWAT1Q58HT5 328 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 DENND2CQ68D51 928 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 MRNIPQ6NTE8 343 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 TXLNBQ8N3L3 684 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 ZNF566Q969W8 418 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 MARK4Q96L34 752 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 MPHOSPH6Q99547 160 aaKnown RBP5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 PCDHAC1Q9H158 963 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 SLC25A32Q9H2D1 315 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 PLCB1Q9NQ66 1216 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 SNX15Q9NRS6 342 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 RXFP3Q9NSD7 469 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 CDC23Q9UJX2 597 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 USP22Q9UPT9 525 aa5.21□□□□□ -1.58
PRPF40A-205ENST00000467114 IGKV2D-30A0A075B6S6 120 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 A0A087WV62 115 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 A8MVJ9 347 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 PECAM1P16284 738 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 ATF7P17544 494 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 SCP2P22307 547 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 CFHR1Q03591 330 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 ZNF91Q05481 1191 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 GALNT1Q10472 559 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 STK3Q13188 491 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 ATP1A4Q13733 1029 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 SEC23BQ15437 767 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 TUBB8Q3ZCM7 444 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 TMEM65Q6PI78 240 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 SMCR8Q8TEV9 937 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 HIST1H2AAQ96QV6 131 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 FOXP1Q9H334 677 aaPredicted RBP5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 DAAM1Q9Y4D1 1078 aa5.2□□□□□ -1.58
PRPF40A-205ENST00000467114 GOLGA6L3A6NEY3 463 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 CD8B2A6NJW9 211 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 EXOC5O00471 708 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 MBPP02686 304 aaPredicted RBP5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 RBL1P28749 1068 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 ID2Q02363 134 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 FAXCQ5TGI0 409 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 GRHL2Q6ISB3 625 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 ANO7Q6IWH7 933 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 RANBP10Q6VN20 620 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 MAFAQ8NHW3 353 aaPredicted RBP5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 TMEM184CQ9NVA4 438 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 SEMA5BQ9P283 1151 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 SLC39A10Q9ULF5 831 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 CNTNAP2Q9UHC6 1331 aa5.19□□□□□ -1.58
PRPF40A-205ENST00000467114 CCDC187A0A096LP49 1063 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 PCDH17O14917 1159 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 NPC1O15118 1278 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 TMPRSS11DO60235 418 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 NTSR2O95665 410 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 CREB1P16220 341 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 PDIA3P30101 505 aaKnown RBP5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 THBS3P49746 956 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 DEUP1Q05D60 604 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 KCNJ12Q14500 433 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 AASDHQ4L235 1098 aaPredicted RBP5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 FAM90A2PQ658T7 463 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 DCDC5Q6ZRR9 648 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 C9orf47Q6ZRZ4 202 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 MEPCEQ7L2J0 689 aaKnown RBP5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 ADAMTS15Q8TE58 950 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 CRB3Q9BUF7 120 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 FSCN3Q9NQT6 498 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 MGAT4CQ9UBM8 478 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 HEY2Q9UBP5 337 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 ASAP1Q9ULH1 1129 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 CA14Q9ULX7 337 aa5.18□□□□□ -1.58
PRPF40A-205ENST00000467114 GXYLT2A0PJZ3 443 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 PODXLO00592 558 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 COQ9O75208 318 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 PEX14O75381 377 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 ITGA5P08648 1049 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 CTSAP10619 480 aa5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 RPS13P62277 151 aaKnown RBP5.17□□□□□ -1.58
PRPF40A-205ENST00000467114 CFHR3Q02985 330 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms