RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ATP6V1HQ9UI12 483 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 FAM220BPB1ANY3 271 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 TRIM49D1C9J1S8 452 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 MSCO60682 206 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 CTSEP14091 401 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 SERPINB5P36952 375 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 COX10Q12887 443 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 GNA13Q14344 377 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 LY6KQ17RY6 165 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 APOBEC3HQ6NTF7 200 aaKnown RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 DAGLBQ8NCG7 672 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 REPS1Q96D71 796 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 SLC4A9Q96Q91 983 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 SH3GL1Q99961 368 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 SH3GL2Q99962 352 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 PARVBQ9HBI1 364 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 SDR42E2A6NKP2 422 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 CCNT2O60583 730 aaKnown RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 TSPAN3O60637 253 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 CTDNEP1O95476 244 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 ZNF23P17027 643 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 CSNK2BP67870 215 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 KLHDC7AQ5VTJ3 777 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 MRPL9Q9BYD2 267 aaKnown RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 CARD9Q9H257 536 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 RERGLQ9H628 205 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 SLC24A3Q9HC58 644 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 AGO4Q9HCK5 861 aaKnown RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 ZDHHC9Q9Y397 364 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 NR5A2O00482 541 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 TRIM13O60858 407 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 DLGAP3O95886 979 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 IGSF6O95976 241 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 MAGEA10P43363 369 aaPredicted RBP8.94□□□□□ -0.98
HPS4-209ENST00000466781 CYP24A1Q07973 514 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 GRIK3Q13003 919 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 DOK6Q6PKX4 331 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 NEK10Q6ZWH5 1172 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 CBWD2Q8IUF1 395 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 CCDC103Q8IW40 242 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 FBXO44Q9H4M3 255 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 ZNF541Q9H0D2 1346 aa8.94□□□□□ -0.98
HPS4-209ENST00000466781 A0A1B0GTH6 734 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 CHURC1-FNTBB4DL54 471 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 RANBP1P43487 201 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 MTM1Q13496 603 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 GJB7Q6PEY0 223 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 MACC1Q6ZN28 852 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 ZNF655Q8N720 491 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 TMEM159Q96B96 161 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 FAM136AQ96C01 138 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 CYP4F12Q9HCS2 524 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 SAE1Q9UBE0 346 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 PIK3C2AO00443 1686 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 A0A088AWK7 358 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 TMEM120BA0PK00 339 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 FAM25AB3EWG3 89 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 FAM25CB3EWG5 89 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 FAM25GB3EWG6 89 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 MSH4O15457 936 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 RAD51CO43502 376 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 OR56A5P0C7T3 313 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 CYP11B2P19099 503 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 TFE3P19532 575 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 ZNF10P21506 573 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 BST2Q10589 180 aaKnown RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 PGM5Q15124 567 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.93□□□□□ -0.98
HPS4-209ENST00000466781 ACOX2Q99424 681 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 GANQ9H2C0 597 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 DDX43Q9NXZ2 648 aaKnown RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 AP4E1Q9UPM8 1137 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 WTIPA6NIX2 430 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 CABYRO75952 493 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 ABCB1P08183 1280 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 RBP1P09455 135 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 SCNN1BP51168 640 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 FMR1Q06787 632 aaKnown RBP eCLIP8.93□□□□□ -0.98
HPS4-209ENST00000466781 MTF1Q14872 753 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 NFE2Q16621 373 aaPredicted RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 NFIL3Q16649 462 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 FSCN1Q16658 493 aaKnown RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 CBWD3Q5JTY5 395 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 CBWD5Q5RIA9 395 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 NOL9Q5SY16 702 aaKnown RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 C11orf88Q6PI97 169 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 TMEM199Q8N511 208 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 C3orf20Q8ND61 904 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 WDR36Q8NI36 951 aaKnown RBP8.93□□□□□ -0.98
HPS4-209ENST00000466781 ZFYVE1Q9HBF4 777 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 A0A087X0T9 212 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 RBAK-RBAKDNI3L0D1 243 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 HS6ST1O60243 411 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 OR6A2O95222 327 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 POMCP01189 267 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 SLC26A2P50443 739 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 GRIK4Q16099 956 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 EPHX4Q8IUS5 362 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 WDR49Q8IV35 697 aa8.93□□□□□ -0.98
HPS4-209ENST00000466781 SLC22A9Q8IVM8 553 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms