RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 CYP4X1Q8N118 509 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 TTC25Q96NG3 672 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 SEZ6LQ9BYH1 1024 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 MYO16Q9Y6X6 1858 aa18.93■□□□□ 0.62
COL9A3-205ENST00000466192 BCLAF3A2AJT9 711 aaKnown RBP18.92■□□□□ 0.62
COL9A3-205ENST00000466192 SRRM3A6NNA2 597 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-205ENST00000466192 ALOX15BO15296 676 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 KCNN4O15554 427 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 OR4Q2P0C623 313 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 CREB1P16220 341 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 TCTN1Q2MV58 587 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 FNBP1LQ5T0N5 605 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 NCBP2-AS2Q69YL0 99 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 EDEM1Q92611 657 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 RTP4Q96DX8 246 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 XPO6Q96QU8 1125 aaKnown RBP18.92■□□□□ 0.62
COL9A3-205ENST00000466192 VPS37BQ9H9H4 285 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 WDR6Q9NNW5 1121 aaKnown RBP18.92■□□□□ 0.62
COL9A3-205ENST00000466192 ANLNQ9NQW6 1124 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 TANC1Q9C0D5 1861 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 EXOC1LA0A1B0GW35 172 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 CDH16O75309 829 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 TMEM63AO94886 807 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 COL6A1P12109 1028 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 ZFXP17010 805 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-205ENST00000466192 ATP5DP30049 168 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 ARL4AP40617 200 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 GATMP50440 423 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 MSS51Q4VC12 460 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 SYCP2LQ5T4T6 812 aa18.92■□□□□ 0.62
COL9A3-205ENST00000466192 FAM193BQ96PV7 902 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-205ENST00000466192 INTS9Q9NV88 658 aaKnown RBP18.92■□□□□ 0.62
COL9A3-205ENST00000466192 RCOR3Q9P2K3 495 aaPredicted RBP18.92■□□□□ 0.62
COL9A3-205ENST00000466192 MYO18AQ92614 2054 aaKnown RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 I6L893 689 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 PQBP1O60828 265 aaKnown RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 AMHP03971 560 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 SPATA2LQ8IUW3 424 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 CCDC33Q8N5R6 958 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 SCAMP5Q8TAC9 235 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 RNF139Q8WU17 664 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 ATXN2LQ8WWM7 1075 aaKnown RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 IRGQQ8WZA9 623 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 CENPTQ96BT3 561 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 SLC9A7Q96T83 725 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 ELAC1Q9H777 363 aaKnown RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 ARHGEF4Q9NR80 690 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 XPO7Q9UIA9 1087 aaKnown RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 FNDC1Q4ZHG4 1894 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 CFAP69A5D8W1 941 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 PITPNM1O00562 1244 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 OAZ2O95190 189 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 NR2C2P49116 596 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 ARL4CP56559 192 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 PGAP3Q96FM1 320 aaPredicted RBP18.91■□□□□ 0.62
COL9A3-205ENST00000466192 PNPLA8Q9NP80 782 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 DTLQ9NZJ0 730 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 PCDHB7Q9Y5E2 793 aa18.91■□□□□ 0.62
COL9A3-205ENST00000466192 ADRA1BP35368 520 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 SLC39A12Q504Y0 691 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 EFHC2Q5JST6 749 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 BSPRYQ5W0U4 402 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 KCNT2Q6UVM3 1135 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 C4orf50Q6ZRC1 276 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 ABI1Q8IZP0 508 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 SCML4Q8N228 414 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 RASSF4Q9H2L5 321 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 DDIT4Q9NX09 232 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 LGALS13Q9UHV8 139 aa18.9■□□□□ 0.62
COL9A3-205ENST00000466192 POC1B-GALNT4F8VUJ3 575 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 CREB3O43889 395 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 TADA2AO75478 443 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 XRCC4Q13426 336 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 SLC45A4Q5BKX6 768 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 CDKL3Q8IVW4 592 aaPredicted RBP18.89■□□□□ 0.62
COL9A3-205ENST00000466192 PYROXD1Q8WU10 500 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 SEPT8Q92599 483 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 NTAN1Q96AB6 310 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 CASD1Q96PB1 797 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 PRMT1Q99873 361 aaKnown RBP18.89■□□□□ 0.62
COL9A3-205ENST00000466192 ZCWPW1Q9H0M4 648 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 PAK5Q9P286 719 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 FBXW11Q9UKB1 542 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 OGDHLQ9ULD0 1010 aa18.89■□□□□ 0.62
COL9A3-205ENST00000466192 RRP15Q9Y3B9 282 aaKnown RBP18.89■□□□□ 0.62
COL9A3-205ENST00000466192 TMEM120BA0PK00 339 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 ANKRD65E5RJM6 399 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 FAM72CH0Y354 149 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 H3BRJ5 948 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 GCAP28676 217 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 GRIK1P39086 918 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 KCNJ11Q14654 390 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 TMED2Q15363 201 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 FAM72AQ5TYM5 149 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 FAM72DQ6L9T8 149 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 SRLQ86TD4 932 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 FAM72BQ86X60 149 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 SCLYQ96I15 445 aa18.89■□□□□ 0.61
COL9A3-205ENST00000466192 RNF208Q9H0X6 261 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms