RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 SNX16P57768 344 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 POU5F1BQ06416 359 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 CCDC15Q0P6D6 951 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 IFRD2Q12894 506 aaPredicted RBP16.9■□□□□ 0.3
SLX4-202ENST00000466154 SLC9A4Q6AI14 798 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 ADGRF2Q8IZF7 708 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 COLGALT1Q8NBJ5 622 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 NPLOC4Q8TAT6 608 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 TFB1MQ8WVM0 346 aaKnown RBP16.9■□□□□ 0.3
SLX4-202ENST00000466154 PGBD4Q96DM1 585 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 MAML3Q96JK9 1138 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 TINF2Q9BSI4 451 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 LRMDAQ9H2I8 198 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 LRRC4Q9HBW1 653 aa16.9■□□□□ 0.3
SLX4-202ENST00000466154 CITO14578 2027 aa16.89■□□□□ 0.3
SLX4-202ENST00000466154 SMAPO00193 183 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 ENO1P06733 434 aaKnown RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 ESRRAP11474 423 aaPredicted RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 MGAT1P26572 445 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 SLC18A1P54219 525 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 MAP3K7CLP57077 242 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 KDSRQ06136 332 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 BST1Q10588 318 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 RIPK1Q13546 671 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 DUSP28Q4G0W2 176 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 RGS9BPQ6ZS82 235 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 CPA4Q9UI42 421 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 C15orf41Q9Y2V0 281 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 ATP5HO75947 161 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 VAV1P15498 845 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 ALDH18A1P54886 795 aaKnown RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 APBB1IPQ7Z5R6 666 aaPredicted RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 ZNF276Q8N554 614 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 ANKRD52Q8NB46 1076 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 KBTBD7Q8WVZ9 684 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 HTR3CQ8WXA8 447 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 MYCBPQ99417 103 aaPredicted RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 CXorf56Q9H5V9 222 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.89■□□□□ 0.29
SLX4-202ENST00000466154 UBQLN1Q9UMX0 589 aaKnown RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 BCLAF3A2AJT9 711 aaKnown RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 NEK3P51956 506 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 SLC8A3P57103 927 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 MXRA7P84157 204 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 PDE1BQ01064 536 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 PAN2Q504Q3 1202 aaKnown RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 PKDCCQ504Y2 493 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 ANKRD20A2Q5SQ80 823 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 ANKRD20A1Q5TYW2 823 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 ZNF410Q86VK4 478 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 SIX6OS1Q8N1H7 587 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 TTC39CQ8N584 583 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 DTX3LQ8TDB6 740 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 USP6NLQ92738 828 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 E2F7Q96AV8 911 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.29
SLX4-202ENST00000466154 APOL2Q9BQE5 337 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 ADAMTS10Q9H324 1103 aa16.89■□□□□ 0.29
SLX4-202ENST00000466154 OTOFQ9HC10 1997 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 MDM4O15151 490 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 YBX3P16989 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
SLX4-202ENST00000466154 GM2AP17900 193 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 CCDC6Q16204 474 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 NCBP2-AS2Q69YL0 99 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 PID1Q7Z2X4 250 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
SLX4-202ENST00000466154 GSDMBQ8TAX9 411 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 SLC7A14Q8TBB6 771 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 TEKT4Q8WW24 435 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 EBNA1BP2Q99848 306 aaKnown RBP16.88■□□□□ 0.29
SLX4-202ENST00000466154 NMUR2Q9GZQ4 415 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 PLAC1Q9HBJ0 212 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 TXNDC16Q9P2K2 825 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 RNF103O00237 685 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 SPAG6O75602 509 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 SAT1P21673 171 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 KCNA4P22459 653 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 PSMB4P28070 264 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 MLH1P40692 756 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 SKIV2L2P42285 1042 aaKnown RBP16.88■□□□□ 0.29
SLX4-202ENST00000466154 ETV4P43268 484 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 MRPS5P82675 430 aaKnown RBP16.88■□□□□ 0.29
SLX4-202ENST00000466154 SYPL2Q5VXT5 272 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 HFE2Q6ZVN8 426 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 HACE1Q8IYU2 909 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 SHCBP1Q8NEM2 672 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 MTMR10Q9NXD2 777 aa16.88■□□□□ 0.29
SLX4-202ENST00000466154 MEIS3P2A8K0S8 358 aa16.87■□□□□ 0.29
SLX4-202ENST00000466154 CTSHP09668 335 aa16.87■□□□□ 0.29
SLX4-202ENST00000466154 TAF6P49848 677 aa16.87■□□□□ 0.29
SLX4-202ENST00000466154 RPL10AP62906 217 aaKnown RBP16.87■□□□□ 0.29
SLX4-202ENST00000466154 HIC1Q14526 733 aa16.87■□□□□ 0.29
SLX4-202ENST00000466154 RASA2Q15283 850 aa16.87■□□□□ 0.29
SLX4-202ENST00000466154 WSCD1Q658N2 575 aa16.87■□□□□ 0.29
SLX4-202ENST00000466154 DENND2DQ9H6A0 471 aaPredicted RBP16.87■□□□□ 0.29
SLX4-202ENST00000466154 UBP1Q9NZI7 540 aa16.87■□□□□ 0.29
SLX4-202ENST00000466154 FETUBQ9UGM5 382 aa16.87■□□□□ 0.29
SLX4-202ENST00000466154 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.87■□□□□ 0.29
SLX4-202ENST00000466154 FCHO1O14526 889 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms