RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 MYEOVQ96EZ4 313 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 BTBD6Q96KE9 485 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 FCRL2Q96LA5 508 aaPredicted RBP12.37□□□□□ -0.43
APTX-213ENST00000465003 FOXQ1Q9C009 403 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 THG1LQ9NWX6 298 aaKnown RBP12.37□□□□□ -0.43
APTX-213ENST00000465003 OBP2AQ9NY56 170 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.37□□□□□ -0.43
APTX-213ENST00000465003 SNX10Q9Y5X0 201 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 PIAS3Q9Y6X2 628 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 DMDP11532 3685 aa12.37□□□□□ -0.43
APTX-213ENST00000465003 ATG2BQ96BY7 2078 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 F5P12259 2224 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SHISA7A6NL88 538 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SOBPA7XYQ1 873 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 I6L893 689 aaPredicted RBP12.36□□□□□ -0.43
APTX-213ENST00000465003 TRIM24O15164 1050 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 IRAK2O43187 625 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 RTN2O75298 545 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 CYP17A1P05093 508 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 PDGFRAP16234 1089 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 PFKLP17858 780 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SGSHP51688 502 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 KPNA1P52294 538 aaPredicted RBP12.36□□□□□ -0.43
APTX-213ENST00000465003 SNX16P57768 344 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 COG7P83436 770 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 MAMLD1Q13495 774 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 RUNX3Q13761 415 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 GSE1Q14687 1217 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SLC18A3Q16572 532 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 ARHGAP29Q52LW3 1261 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 LY6G5CQ5SRR4 150 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 Q6ZNB5 142 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 FAM131BQ86XD5 332 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 ZDHHC17Q8IUH5 632 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SFTPA1Q8IWL2 248 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 EDAQ92838 391 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 RNF34Q969K3 372 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 E2F7Q96AV8 911 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 CCDC42Q96M95 316 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SERPINB11Q96P15 392 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 CDK5RAP1Q96SZ6 601 aaKnown RBP12.36□□□□□ -0.43
APTX-213ENST00000465003 MAGEB5Q9BZ81 275 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 ISCUQ9H1K1 167 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 ARHGEF3Q9NR81 526 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 MTF2Q9Y483 593 aaPredicted RBP12.36□□□□□ -0.43
APTX-213ENST00000465003 C2CD4BA6NLJ0 364 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 STK25O00506 426 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 IGLV3-25P01717 112 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 CDC25BP30305 580 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SLC6A4P31645 630 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 NOS2P35228 1153 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 GALCP54803 685 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 CDK17Q00537 523 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 TRIP4Q15650 581 aaPredicted RBP12.36□□□□□ -0.43
APTX-213ENST00000465003 ANO4Q32M45 955 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 CCDC14Q49A88 953 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SLC44A4Q53GD3 710 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SMYD5Q6GMV2 418 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 DCUN1D2Q6PH85 259 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 ADGRG2Q8IZP9 1017 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 FLCNQ8NFG4 579 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 NPY6RQ99463 290 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 FBRSL1Q9HCM7 1045 aaKnown RBP12.36□□□□□ -0.43
APTX-213ENST00000465003 C11orf16Q9NQ32 467 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 SLC2A4RGQ9NR83 387 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 ASNSD1Q9NWL6 643 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 LSM7Q9UK45 103 aaKnown RBP12.36□□□□□ -0.43
APTX-213ENST00000465003 NENFQ9UMX5 172 aa12.36□□□□□ -0.43
APTX-213ENST00000465003 NDRG2Q9UN36 371 aaKnown RBP12.36□□□□□ -0.43
APTX-213ENST00000465003 E2F8A0AVK6 867 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 PI4K2BG5E9Z4 385 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 CCP110O43303 1012 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 IGLV3-27P01718 113 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 GLI1P08151 1106 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 GZMAP12544 262 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
APTX-213ENST00000465003 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 ZNF252P-AS1Q0IIN9 211 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 DHCR24Q15392 516 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 PPP1R15BQ5SWA1 713 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 TRIM67Q6ZTA4 783 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 HTR3DQ70Z44 454 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 DDX42Q86XP3 938 aaKnown RBP eCLIP12.35□□□□□ -0.43
APTX-213ENST00000465003 CPNE8Q86YQ8 564 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 UBALD2Q8IYN6 164 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 ZNF276Q8N554 614 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 ATP2A3Q93084 1043 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 TLR6Q9Y2C9 796 aa12.35□□□□□ -0.43
APTX-213ENST00000465003 SSU72P8A0A1W2PR75 194 aa12.34□□□□□ -0.43
APTX-213ENST00000465003 SIGLEC16A6NMB1 481 aa12.34□□□□□ -0.43
APTX-213ENST00000465003 TCF3P15923 654 aa12.34□□□□□ -0.43
APTX-213ENST00000465003 CTHP32929 405 aa12.34□□□□□ -0.43
APTX-213ENST00000465003 GJA4P35212 333 aa12.34□□□□□ -0.43
APTX-213ENST00000465003 SLC6A11P48066 632 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms