RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ADAMTS1Q9UHI8 967 aa10□□□□□ -0.81
APP-213ENST00000464867 MYH11P35749 1972 aa9.99□□□□□ -0.81
APP-213ENST00000464867 A0A1B0GTQ1 180 aa9.99□□□□□ -0.81
APP-213ENST00000464867 ZNF840PA6NDX5 716 aa9.99□□□□□ -0.81
APP-213ENST00000464867 KPNA7A9QM74 516 aa9.99□□□□□ -0.81
APP-213ENST00000464867 KCNJ18B7U540 433 aa9.99□□□□□ -0.81
APP-213ENST00000464867 CBX4O00257 560 aa9.99□□□□□ -0.81
APP-213ENST00000464867 YKT6O15498 198 aa9.99□□□□□ -0.81
APP-213ENST00000464867 SUV39H1O43463 412 aa9.99□□□□□ -0.81
APP-213ENST00000464867 OIP5O43482 229 aa9.99□□□□□ -0.81
APP-213ENST00000464867 BNIP3LO60238 219 aa9.99□□□□□ -0.81
APP-213ENST00000464867 CDKL5O76039 1030 aa9.99□□□□□ -0.81
APP-213ENST00000464867 CTSKP43235 329 aa9.99□□□□□ -0.81
APP-213ENST00000464867 E2F1Q01094 437 aa9.99□□□□□ -0.81
APP-213ENST00000464867 E2F5Q15329 346 aa9.99□□□□□ -0.81
APP-213ENST00000464867 FUT11Q495W5 492 aa9.99□□□□□ -0.81
APP-213ENST00000464867 CFAP221Q4G0U5 840 aa9.99□□□□□ -0.81
APP-213ENST00000464867 C4orf50Q6ZRC1 276 aa9.99□□□□□ -0.81
APP-213ENST00000464867 DENND5BQ6ZUT9 1274 aa9.99□□□□□ -0.81
APP-213ENST00000464867 FAM124AQ86V42 546 aa9.99□□□□□ -0.81
APP-213ENST00000464867 GATAD2AQ86YP4 633 aa9.99□□□□□ -0.81
APP-213ENST00000464867 TMPRSS6Q8IU80 811 aa9.99□□□□□ -0.81
APP-213ENST00000464867 FUBP3Q96I24 572 aaKnown RBP eCLIP9.99□□□□□ -0.81
APP-213ENST00000464867 CEP295NLQ96MC4 621 aa9.99□□□□□ -0.81
APP-213ENST00000464867 MMS19Q96T76 1030 aa9.99□□□□□ -0.81
APP-213ENST00000464867 SPHK2Q9NRA0 654 aa9.99□□□□□ -0.81
APP-213ENST00000464867 DDX43Q9NXZ2 648 aaKnown RBP9.99□□□□□ -0.81
APP-213ENST00000464867 ORC3Q9UBD5 711 aaPredicted RBP9.99□□□□□ -0.81
APP-213ENST00000464867 GTF3C4Q9UKN8 822 aa9.99□□□□□ -0.81
APP-213ENST00000464867 HCN2Q9UL51 889 aa9.99□□□□□ -0.81
APP-213ENST00000464867 DERAQ9Y315 318 aa9.99□□□□□ -0.81
APP-213ENST00000464867 STON1Q9Y6Q2 735 aa9.99□□□□□ -0.81
APP-213ENST00000464867 TP53BP1Q12888 1972 aaPredicted RBP9.99□□□□□ -0.81
APP-213ENST00000464867 NPC1O15118 1278 aa9.98□□□□□ -0.81
APP-213ENST00000464867 HUS1O60921 280 aa9.98□□□□□ -0.81
APP-213ENST00000464867 HIP1RO75146 1068 aa9.98□□□□□ -0.81
APP-213ENST00000464867 IGLV3-19P01714 112 aa9.98□□□□□ -0.81
APP-213ENST00000464867 MPOP05164 745 aa9.98□□□□□ -0.81
APP-213ENST00000464867 KRT2P35908 639 aa9.98□□□□□ -0.81
APP-213ENST00000464867 MAP2K3P46734 347 aa9.98□□□□□ -0.81
APP-213ENST00000464867 GABREP78334 506 aa9.98□□□□□ -0.81
APP-213ENST00000464867 NFKB2Q00653 900 aa9.98□□□□□ -0.81
APP-213ENST00000464867 ENOX2Q16206 610 aaKnown RBP9.98□□□□□ -0.81
APP-213ENST00000464867 EFHC2Q5JST6 749 aa9.98□□□□□ -0.81
APP-213ENST00000464867 TMEM25Q86YD3 366 aa9.98□□□□□ -0.81
APP-213ENST00000464867 RFFLQ8WZ73 363 aa9.98□□□□□ -0.81
APP-213ENST00000464867 SPATA17Q96L03 361 aa9.98□□□□□ -0.81
APP-213ENST00000464867 ZNF560Q96MR9 790 aa9.98□□□□□ -0.81
APP-213ENST00000464867 SLITRK1Q96PX8 696 aa9.98□□□□□ -0.81
APP-213ENST00000464867 ELF4Q99607 663 aaPredicted RBP9.98□□□□□ -0.81
APP-213ENST00000464867 CCSER1Q9C0I3 900 aa9.98□□□□□ -0.81
APP-213ENST00000464867 LRRC4CQ9HCJ2 640 aa9.98□□□□□ -0.81
APP-213ENST00000464867 STARD5Q9NSY2 213 aa9.98□□□□□ -0.81
APP-213ENST00000464867 DPP3Q9NY33 737 aa9.98□□□□□ -0.81
APP-213ENST00000464867 WDR35Q9P2L0 1181 aa9.98□□□□□ -0.81
APP-213ENST00000464867 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.98□□□□□ -0.81
APP-213ENST00000464867 DNMT3AQ9Y6K1 912 aaPredicted RBP9.98□□□□□ -0.81
APP-213ENST00000464867 POM121CA8CG34 1229 aa9.97□□□□□ -0.81
APP-213ENST00000464867 SHISA8B8ZZ34 492 aa9.97□□□□□ -0.81
APP-213ENST00000464867 WASH3PC4AMC7 463 aa9.97□□□□□ -0.81
APP-213ENST00000464867 PRRT4C9JH25 899 aa9.97□□□□□ -0.81
APP-213ENST00000464867 NEDD8-MDP1E9PL57 170 aa9.97□□□□□ -0.81
APP-213ENST00000464867 TRIM24O15164 1050 aa9.97□□□□□ -0.81
APP-213ENST00000464867 OGTO15294 1046 aa9.97□□□□□ -0.81
APP-213ENST00000464867 OLFM2O95897 454 aa9.97□□□□□ -0.81
APP-213ENST00000464867 MT-CO3P00414 261 aa9.97□□□□□ -0.81
APP-213ENST00000464867 CKMT2P17540 419 aa9.97□□□□□ -0.81
APP-213ENST00000464867 RPS6KB1P23443 525 aa9.97□□□□□ -0.81
APP-213ENST00000464867 CD27P26842 260 aa9.97□□□□□ -0.81
APP-213ENST00000464867 PCSK1P29120 753 aa9.97□□□□□ -0.81
APP-213ENST00000464867 CCT6AP40227 531 aaKnown RBP9.97□□□□□ -0.81
APP-213ENST00000464867 PNPLA4P41247 253 aa9.97□□□□□ -0.81
APP-213ENST00000464867 MAGEA11P43364 429 aa9.97□□□□□ -0.81
APP-213ENST00000464867 AFMP43652 599 aa9.97□□□□□ -0.81
APP-213ENST00000464867 ARRB1P49407 418 aaPredicted RBP9.97□□□□□ -0.81
APP-213ENST00000464867 LIG4P49917 911 aa9.97□□□□□ -0.81
APP-213ENST00000464867 BCAT1P54687 386 aa9.97□□□□□ -0.81
APP-213ENST00000464867 EVCP57679 992 aa9.97□□□□□ -0.81
APP-213ENST00000464867 TLE1Q04724 770 aa9.97□□□□□ -0.81
APP-213ENST00000464867 EARS2Q5JPH6 523 aaKnown RBP9.97□□□□□ -0.81
APP-213ENST00000464867 TMEM86AQ8N2M4 240 aa9.97□□□□□ -0.81
APP-213ENST00000464867 EXD3Q8N9H8 876 aa9.97□□□□□ -0.81
APP-213ENST00000464867 NSUN7Q8NE18 718 aaKnown RBP9.97□□□□□ -0.81
APP-213ENST00000464867 UCMAQ8WVF2 138 aa9.97□□□□□ -0.81
APP-213ENST00000464867 LIN37Q96GY3 246 aaPredicted RBP9.97□□□□□ -0.81
APP-213ENST00000464867 NTPCRQ9BSD7 190 aaKnown RBP9.97□□□□□ -0.81
APP-213ENST00000464867 BBS2Q9BXC9 721 aa9.97□□□□□ -0.81
APP-213ENST00000464867 AGXT2Q9BYV1 514 aa9.97□□□□□ -0.81
APP-213ENST00000464867 MKRN2Q9H000 416 aaKnown RBP9.97□□□□□ -0.81
APP-213ENST00000464867 MAGEC2Q9UBF1 373 aaPredicted RBP9.97□□□□□ -0.81
APP-213ENST00000464867 ATXN7L1Q9ULK2 861 aaPredicted RBP9.97□□□□□ -0.81
APP-213ENST00000464867 KIAA1024Q9UPX6 916 aa9.97□□□□□ -0.81
APP-213ENST00000464867 ITPR3Q14573 2671 aa9.97□□□□□ -0.81
APP-213ENST00000464867 NBPF19A0A087WUL8 3843 aa9.96□□□□□ -0.81
APP-213ENST00000464867 CENPEQ02224 2701 aa9.96□□□□□ -0.81
APP-213ENST00000464867 ITPR2Q14571 2701 aa9.96□□□□□ -0.81
APP-213ENST00000464867 A6NJY4 79 aa9.96□□□□□ -0.82
APP-213ENST00000464867 H0YCG3 227 aa9.96□□□□□ -0.82
APP-213ENST00000464867 VILLO15195 856 aa9.96□□□□□ -0.82
APP-213ENST00000464867 FSBPO95073 299 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms