RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 LRRC38Q5VT99 294 aa13.22□□□□□ -0.29
NFXL1-203ENST00000464756 RAB44Q7Z6P3 723 aaPredicted RBP13.22□□□□□ -0.29
NFXL1-203ENST00000464756 HAPLN2Q9GZV7 340 aa13.22□□□□□ -0.29
NFXL1-203ENST00000464756 FZD8Q9H461 694 aa13.22□□□□□ -0.29
NFXL1-203ENST00000464756 PCDH18Q9HCL0 1135 aa13.22□□□□□ -0.29
NFXL1-203ENST00000464756 ZDHHC18Q9NUE0 388 aa13.22□□□□□ -0.29
NFXL1-203ENST00000464756 SMPD4Q9NXE4 827 aa13.22□□□□□ -0.29
NFXL1-203ENST00000464756 ATP5HO75947 161 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 ASPAP45381 313 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 KCNJ2P63252 427 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 TWF1Q12792 350 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 MAP2K5Q13163 448 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 RBBP5Q15291 538 aaKnown RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 CA9Q16790 459 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 RASIP1Q5U651 963 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 PIP4K2CQ8TBX8 421 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 GPBP1L1Q9HC44 474 aaPredicted RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 NT5MQ9NPB1 228 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 ARHGEF38Q9NXL2 777 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 SLC17A7Q9P2U7 560 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 TMEM59LQ9UK28 342 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 DNAJC16Q9Y2G8 782 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 IPPQ9Y573 584 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 LTFP02788 710 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 F7P08709 466 aaPredicted RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 DARSP14868 501 aaKnown RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 NQO1P15559 274 aaKnown RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 NPR3P17342 541 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 ARHGAP1Q07960 439 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 CTXN3Q4LDR2 81 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 FNBP1LQ5T0N5 605 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 RNF180Q86T96 592 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 ANKRD52Q8NB46 1076 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 PPHLN1Q8NEY8 458 aaKnown RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 DDX1Q92499 740 aaKnown RBP13.21□□□□□ -0.29
NFXL1-203ENST00000464756 FBXO32Q969P5 355 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 TMEM120AQ9BXJ8 343 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 VCXQ9H320 206 aa13.21□□□□□ -0.29
NFXL1-203ENST00000464756 C2orf71A6NGG8 1288 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 NT5C1B-RDH14C9J2C7 533 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 GFAPP14136 432 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 PAPOLAP51003 745 aaKnown RBP13.21□□□□□ -0.3
NFXL1-203ENST00000464756 CSE1LP55060 971 aaKnown RBP13.21□□□□□ -0.3
NFXL1-203ENST00000464756 NBPF20Q3BBV1 942 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 N4BP2L1Q5TBK1 243 aaPredicted RBP13.21□□□□□ -0.3
NFXL1-203ENST00000464756 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 ACAD11Q709F0 780 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 DDIASQ8IXT1 998 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 FBXO41Q8TF61 875 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 CPT1BQ92523 772 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 TMA16Q96EY4 203 aaKnown RBP13.21□□□□□ -0.3
NFXL1-203ENST00000464756 GBP5Q96PP8 586 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 HERPUD2Q9BSE4 406 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 FICDQ9BVA6 458 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 OR12D3Q9UGF7 316 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 VANGL2Q9ULK5 521 aa13.21□□□□□ -0.3
NFXL1-203ENST00000464756 E9PBE3 544 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 MAP3K7O43318 606 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 KLHL41O60662 606 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 GRM5P41594 1212 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 MMP13P45452 471 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 SERPINB9P50453 376 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 PLK1P53350 603 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 SLC39A12Q504Y0 691 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 KCNK16Q96T55 309 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 CDHR5Q9HBB8 845 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 SNX10Q9Y5X0 201 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 ANKRD36CQ5JPF3 1778 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 SLC12A8A0AV02 714 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
NFXL1-203ENST00000464756 VAPBO95292 243 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 ITGAVP06756 1048 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 ERCC2P18074 760 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 CDC25CP30307 473 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 CCDC142Q17RM4 750 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 ANKRD20A2Q5SQ80 823 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 ANKRD20A1Q5TYW2 823 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 STKLD1Q8NE28 680 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 CKAP2Q8WWK9 683 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 PIWIL1Q96J94 861 aaKnown RBP13.2□□□□□ -0.3
NFXL1-203ENST00000464756 TRIM56Q9BRZ2 755 aaKnown RBP13.2□□□□□ -0.3
NFXL1-203ENST00000464756 MTG1Q9BT17 334 aaPredicted RBP13.2□□□□□ -0.3
NFXL1-203ENST00000464756 MID2Q9UJV3 735 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 KIAA0100Q14667 2235 aaKnown RBP13.2□□□□□ -0.3
NFXL1-203ENST00000464756 N4BP2Q86UW6 1770 aaPredicted RBP13.2□□□□□ -0.3
NFXL1-203ENST00000464756 XPAP23025 273 aaPredicted RBP13.2□□□□□ -0.3
NFXL1-203ENST00000464756 LHX1P48742 406 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 FLT3LGP49771 235 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 FAM171A1Q5VUB5 890 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 ZNF572Q7Z3I7 529 aaPredicted RBP13.2□□□□□ -0.3
NFXL1-203ENST00000464756 APBA2Q99767 749 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 TUBB6Q9BUF5 446 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 SDCBP2Q9H190 292 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 POPDC2Q9HBU9 364 aa13.2□□□□□ -0.3
NFXL1-203ENST00000464756 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms