RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 WDR78Q5VTH9 848 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 KCNT2Q6UVM3 1135 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 SH3TC2Q8TF17 1288 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 TBC1D31Q96DN5 1066 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 PTPN18Q99952 460 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 ALG13Q9NP73 1137 aaKnown RBP11.34□□□□□ -0.59
PITRM1-209ENST00000464395 ANLNQ9NQW6 1124 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 AP4E1Q9UPM8 1137 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 MYO18AQ92614 2054 aaKnown RBP11.34□□□□□ -0.59
PITRM1-209ENST00000464395 DCAF8L1A6NGE4 600 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 CDK18Q07002 472 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 TMEM62Q0P6H9 643 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 IQSEC1Q6DN90 963 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 SCYL2Q6P3W7 929 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 ANKRD23Q86SG2 305 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 CDKL3Q8IVW4 592 aaPredicted RBP11.34□□□□□ -0.59
PITRM1-209ENST00000464395 PPP1R13LQ8WUF5 828 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 APBB2Q92870 758 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 CFAP36Q96G28 342 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 C7orf26Q96N11 449 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 SLC2A13Q96QE2 648 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 NPY6RQ99463 290 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 TINF2Q9BSI4 451 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 TSSK1BQ9BXA7 367 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 CADM1Q9BY67 442 aaKnown RBP11.34□□□□□ -0.59
PITRM1-209ENST00000464395 TMPRSS4Q9NRS4 437 aa11.34□□□□□ -0.59
PITRM1-209ENST00000464395 RCOR3Q9P2K3 495 aaPredicted RBP11.34□□□□□ -0.59
PITRM1-209ENST00000464395 SF3B1O75533 1304 aaKnown RBP eCLIP11.34□□□□□ -0.594e-6■■■■■ 79.3
PITRM1-209ENST00000464395 RRN3P2A6NIE6 340 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 ZBED1O96006 694 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 SNRPAP09012 282 aaKnown RBP11.33□□□□□ -0.59
PITRM1-209ENST00000464395 ATP2A2P16615 1042 aaKnown RBP11.33□□□□□ -0.59
PITRM1-209ENST00000464395 GOT1P17174 413 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 AKAP5P24588 427 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 PTPN4P29074 926 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 BCAT1P54687 386 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 YWHAGP61981 247 aaKnown RBP eCLIP11.33□□□□□ -0.59
PITRM1-209ENST00000464395 CDK16Q00536 496 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 SEMA3BQ13214 749 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 DPYSQ14117 519 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 KRT72Q14CN4 511 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 DGKDQ16760 1214 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 EP400NLQ6ZTU2 488 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 GSDMBQ8TAX9 411 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 NDRG1Q92597 394 aaKnown RBP11.33□□□□□ -0.59
PITRM1-209ENST00000464395 HSFY1Q96LI6 401 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 MCMBPQ9BTE3 642 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 KLC2Q9H0B6 622 aa11.33□□□□□ -0.59
PITRM1-209ENST00000464395 RPL26L1Q9UNX3 145 aaKnown RBP11.33□□□□□ -0.59
PITRM1-209ENST00000464395 C2orf71A6NGG8 1288 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 KPNA7A9QM74 516 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 GABRDO14764 452 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 AMPD1P23109 780 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 WARSP23381 471 aaKnown RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 EPHB2P29323 1055 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 CRHR1P34998 444 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 MATKP42679 507 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 CSRP3P50461 194 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 WASHC5Q12768 1159 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 TUBB3Q13509 450 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 FBXO47Q5MNV8 452 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 NOTUMQ6P988 496 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 BHLHA9Q7RTU4 235 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 PSTKQ8IV42 348 aaKnown RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 UNC5BQ8IZJ1 945 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 MAB21L3Q8N8X9 362 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 OR6J1Q8NGC5 347 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 ZNF778Q96MU6 729 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 OSMRQ99650 979 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 HNRNPABQ99729 332 aaKnown RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 MECRQ9BV79 373 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 TMEM120AQ9BXJ8 343 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 EIF2B3Q9NR50 452 aaKnown RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 UBQLN1Q9UMX0 589 aaKnown RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 NRCAMQ92823 1304 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 XPO1O14980 1071 aaKnown RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 APRTP07741 180 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 MLNP12872 115 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 GLUD2P49448 558 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 SETDB1Q15047 1291 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 SLC25A52Q3SY17 297 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 STXBP5Q5T5C0 1151 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 CEP57Q86XR8 500 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 BEST2Q8NFU1 509 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 OR6Y1Q8NGX8 325 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 ZSCAN18Q8TBC5 510 aaPredicted RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 KCTD13Q8WZ19 329 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 GCOM2Q9BZD3 368 aaPredicted RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 ABHD16BQ9H3Z7 469 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 DENND2DQ9H6A0 471 aaPredicted RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 ZNF395Q9H8N7 513 aaPredicted RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 FBXO6Q9NRD1 293 aaPredicted RBP11.33□□□□□ -0.6
PITRM1-209ENST00000464395 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 HEY2Q9UBP5 337 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 ZFP69BQ9UJL9 534 aa11.33□□□□□ -0.6
PITRM1-209ENST00000464395 STK38LQ9Y2H1 464 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms