RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 OR10T2Q8NGX3 314 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 SLC7A14Q8TBB6 771 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 ATXN2LQ8WWM7 1075 aaKnown RBP22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 PGAP3Q96FM1 320 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 ZNF317Q96PQ6 595 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 RHOBTB2Q9BYZ6 727 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 PNPLA8Q9NP80 782 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 TMLHEQ9NVH6 421 aa22.52■■□□□ 1.2
PDLIM2-216ENST00000464275 SYNJ2BP-COX16A0A087WUM0 186 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 TCRBV7S3A2A0A539 114 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 TMEM189-UBE2V1I3L0A0 370 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 CHADO15335 359 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 CDH16O75309 829 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 DDHD2O94830 711 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 TMEM63AO94886 807 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 COL6A1P12109 1028 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 SELPP16109 830 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 GBE1Q04446 702 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 RNASELQ05823 741 aaKnown RBP22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 ITIH4Q14624 930 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 KCNJ11Q14654 390 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 EFHC2Q5JST6 749 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 ICE2Q659A1 982 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 PM20D1Q6GTS8 502 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 PPP1R21Q6ZMI0 780 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 BZW1Q7L1Q6 419 aaKnown RBP22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 ZNF296Q8WUU4 475 aaPredicted RBP22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 NTAN1Q96AB6 310 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 SELENOSQ9BQE4 189 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 KDM4CQ9H3R0 1056 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 PIGVQ9NUD9 493 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 INTS9Q9NV88 658 aaKnown RBP22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 COX16Q9P0S2 106 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 VWA8A3KMH1 1905 aa22.51■■□□□ 1.19
PDLIM2-216ENST00000464275 NRLP54845 237 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 GAD2Q05329 585 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 SLC10A2Q12908 348 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 FNBP1LQ5T0N5 605 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 BHLHA9Q7RTU4 235 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 LRRTM3Q86VH5 581 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 EXOC3L1Q86VI1 746 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 ZNF280BQ86YH2 543 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 COLGALT2Q8IYK4 626 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 PDIK1LQ8N165 341 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 TAB3Q8N5C8 712 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 QKIQ96PU8 341 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 TMEM209Q96SK2 561 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 VPS37BQ9H9H4 285 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 ZMYND8Q9ULU4 1186 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 HACD1B0YJ81 288 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 NCAM1P13591 858 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 CDK7P50613 346 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 YWHAHQ04917 246 aaPredicted RBP22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 QPCTQ16769 361 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 CCDC13Q8IYE1 715 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 CCDC197Q8NCU1 140 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 PYROXD1Q8WU10 500 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 RNF139Q8WU17 664 aa22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 ARHGEF2Q92974 986 aaKnown RBP22.5■■□□□ 1.19
PDLIM2-216ENST00000464275 MAP3K6O95382 1288 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 F9P00740 461 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 SCAPQ12770 1279 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 CBLBQ13191 982 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 BFSP2Q13515 415 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 HP1BP3Q5SSJ5 553 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 C4orf50Q6ZRC1 276 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 FRMD8Q9BZ67 464 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 PPCSQ9HAB8 311 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 WDR6Q9NNW5 1121 aaKnown RBP22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 ARHGEF4Q9NR80 690 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 TMEM161AQ9NX61 479 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 DNAH12Q6ZR08 3092 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 EXOC1LA0A1B0GW35 172 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 F8W810 466 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 B4GALT3O60512 393 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 DGKIO75912 1065 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 TSHRP16473 764 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 PHBP35232 272 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 ADRA1BP35368 520 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 KCNT2Q6UVM3 1135 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 TDRPQ86YL5 185 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 ANKMY2Q8IV38 441 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 ATP11CQ8NB49 1132 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 FAM193BQ96PV7 902 aaPredicted RBP22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 KLC2Q9H0B6 622 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 RAB6BQ9NRW1 208 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 ETNK2Q9NVF9 386 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 TBC1D13Q9NVG8 400 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 EURLQ9NYK6 297 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 DTLQ9NZJ0 730 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 CTNNAL1Q9UBT7 734 aa22.49■■□□□ 1.19
PDLIM2-216ENST00000464275 SF3B1O75533 1304 aaKnown RBP eCLIP22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 GCATO75600 419 aa22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 HNRNPH1P31943 449 aaKnown RBP22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 MSS51Q4VC12 460 aa22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 CCDC38Q502W7 563 aa22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 SPATA2LQ8IUW3 424 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 MDM1Q8TC05 714 aa22.48■■□□□ 1.19
PDLIM2-216ENST00000464275 OLFM3Q96PB7 478 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms