RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 CWC15Q9P013 229 aaKnown RBP16.03■□□□□ 0.16
GYPC-205ENST00000464053 SNX10Q9Y5X0 201 aa16.03■□□□□ 0.16
GYPC-205ENST00000464053 LAMA3Q16787 3333 aa16.03■□□□□ 0.16
GYPC-205ENST00000464053 ZSCAN5CA6NGD5 496 aaPredicted RBP16.02■□□□□ 0.16
GYPC-205ENST00000464053 FAM72CH0Y354 149 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 H0YGN5 161 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 DYNC1I1O14576 645 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 TTI1O43156 1089 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 GOT1P17174 413 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 CHRNA3P32297 505 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 ERVK-21P61565 698 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 SCAPQ12770 1279 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 GLE1Q53GS7 698 aaKnown RBP16.02■□□□□ 0.16
GYPC-205ENST00000464053 FAM72AQ5TYM5 149 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 FAM72DQ6L9T8 149 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 FAM72BQ86X60 149 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 PSTKQ8IV42 348 aaKnown RBP16.02■□□□□ 0.16
GYPC-205ENST00000464053 RNF34Q969K3 372 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 FAF2Q96CS3 445 aa16.02■□□□□ 0.16
GYPC-205ENST00000464053 ZNF512Q96ME7 567 aaPredicted RBP16.02■□□□□ 0.16
GYPC-205ENST00000464053 MTCL1Q9Y4B5 1905 aaKnown RBP16.02■□□□□ 0.15
GYPC-205ENST00000464053 ZNF840PA6NDX5 716 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 PTGIRP43119 386 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 EPHB3P54753 998 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 GPM6BQ13491 265 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 VEPH1Q14D04 833 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 TAF12Q16514 161 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 CCNG2Q16589 344 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 EFHC2Q5JST6 749 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 C10orf120Q5SQS8 335 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 NPNTQ6UXI9 565 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 KREMEN2Q8NCW0 462 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 PSMG2Q969U7 264 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 TRMT2BQ96GJ1 504 aaKnown RBP16.01■□□□□ 0.15
GYPC-205ENST00000464053 CSPG4P5Q96PW8 444 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 ZNF670Q9BS34 389 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 MAK16Q9BXY0 300 aaKnown RBP16.01■□□□□ 0.15
GYPC-205ENST00000464053 NKX2-4Q9H2Z4 354 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 ZNF334Q9HCZ1 680 aaPredicted RBP16.01■□□□□ 0.15
GYPC-205ENST00000464053 ARHGEF38Q9NXL2 777 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 ANAPC1Q9H1A4 1944 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 TARSL2A2RTX5 802 aaKnown RBP16.01■□□□□ 0.15
GYPC-205ENST00000464053 H3BNC9 293 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 CREB3O43889 395 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 HEXIM1O94992 359 aaKnown RBP16.01■□□□□ 0.15
GYPC-205ENST00000464053 C8AP07357 584 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 PECAM1P16284 738 aaPredicted RBP16.01■□□□□ 0.15
GYPC-205ENST00000464053 GGCXP38435 758 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 CLCN4P51793 760 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 AIF1P55008 147 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 VSNL1P62760 191 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 DR1Q01658 176 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 ARL13BQ3SXY8 428 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 VSIG1Q86XK7 387 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 MIB1Q86YT6 1006 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 SERPINB11Q96P15 392 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.01■□□□□ 0.158e-7■■□□□ 14.5
GYPC-205ENST00000464053 STIM2Q9P246 746 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
GYPC-205ENST00000464053 ATG2AQ2TAZ0 1938 aa16■□□□□ 0.15
GYPC-205ENST00000464053 TNRC18O15417 2968 aaPredicted RBP16■□□□□ 0.15
GYPC-205ENST00000464053 HSFX4A0A1B0GTS1 333 aaPredicted RBP16■□□□□ 0.15
GYPC-205ENST00000464053 HSFX3A0A1B0GWH4 333 aaPredicted RBP16■□□□□ 0.15
GYPC-205ENST00000464053 LIASO43766 372 aa16■□□□□ 0.15
GYPC-205ENST00000464053 TLR5O60602 858 aa16■□□□□ 0.15
GYPC-205ENST00000464053 GLUD1P00367 558 aa16■□□□□ 0.15
GYPC-205ENST00000464053 AMPD1P23109 780 aa16■□□□□ 0.15
GYPC-205ENST00000464053 FNTAP49354 379 aa16■□□□□ 0.15
GYPC-205ENST00000464053 OTUD4Q01804 1114 aaKnown RBP16■□□□□ 0.15
GYPC-205ENST00000464053 SEMA3BQ13214 749 aa16■□□□□ 0.15
GYPC-205ENST00000464053 TRADDQ15628 312 aa16■□□□□ 0.15
GYPC-205ENST00000464053 SNX30Q5VWJ9 437 aa16■□□□□ 0.15
GYPC-205ENST00000464053 TMEM150AQ86TG1 271 aa16■□□□□ 0.15
GYPC-205ENST00000464053 CCDC105Q8IYK2 499 aa16■□□□□ 0.15
GYPC-205ENST00000464053 PLD5Q8N7P1 536 aa16■□□□□ 0.15
GYPC-205ENST00000464053 PDZD8Q8NEN9 1154 aa16■□□□□ 0.15
GYPC-205ENST00000464053 CCDC26Q8TAB7 109 aa16■□□□□ 0.15
GYPC-205ENST00000464053 ACTL9Q8TC94 416 aa16■□□□□ 0.15
GYPC-205ENST00000464053 OVCA2Q8WZ82 227 aa16■□□□□ 0.15
GYPC-205ENST00000464053 SLC39A13Q96H72 371 aa16■□□□□ 0.15
GYPC-205ENST00000464053 FCRL2Q96LA5 508 aaPredicted RBP16■□□□□ 0.15
GYPC-205ENST00000464053 SAMD11Q96NU1 681 aa16■□□□□ 0.15
GYPC-205ENST00000464053 TRIM51Q9BSJ1 452 aa16■□□□□ 0.15
GYPC-205ENST00000464053 OLA1Q9NTK5 396 aaKnown RBP16■□□□□ 0.15
GYPC-205ENST00000464053 MARCH2Q9P0N8 246 aa16■□□□□ 0.15
GYPC-205ENST00000464053 XPO7Q9UIA9 1087 aaKnown RBP16■□□□□ 0.15
GYPC-205ENST00000464053 RASAL2Q9UJF2 1139 aa16■□□□□ 0.15
GYPC-205ENST00000464053 DNPEPQ9ULA0 475 aa16■□□□□ 0.15
GYPC-205ENST00000464053 TLR6Q9Y2C9 796 aa16■□□□□ 0.15
GYPC-205ENST00000464053 MFHAS1Q9Y4C4 1052 aa16■□□□□ 0.15
GYPC-205ENST00000464053 TRANK1O15050 2925 aa16■□□□□ 0.15
GYPC-205ENST00000464053 ESYT3A0FGR9 886 aa15.99■□□□□ 0.15
GYPC-205ENST00000464053 KCNU1A8MYU2 1149 aa15.99■□□□□ 0.15
GYPC-205ENST00000464053 ZNF487B1APH4 448 aa15.99■□□□□ 0.15
GYPC-205ENST00000464053 CCR1P32246 355 aa15.99■□□□□ 0.15
GYPC-205ENST00000464053 GUCY2DQ02846 1103 aa15.99■□□□□ 0.15
GYPC-205ENST00000464053 BRMS1LQ5PSV4 323 aa15.99■□□□□ 0.15
GYPC-205ENST00000464053 SLC9A4Q6AI14 798 aa15.99■□□□□ 0.15
GYPC-205ENST00000464053 C1orf228Q6PIY5 440 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms