RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 RBBP8NLQ8NC74 664 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-209ENST00000463631 UCMAQ8WVF2 138 aa18.16■□□□□ 0.5
HMGN1-209ENST00000463631 PIWIL1Q96J94 861 aaKnown RBP18.16■□□□□ 0.5
HMGN1-209ENST00000463631 IMPG2Q9BZV3 1241 aa18.16■□□□□ 0.5
HMGN1-209ENST00000463631 DCLK3Q9C098 648 aa18.16■□□□□ 0.5
HMGN1-209ENST00000463631 FAM13BQ9NYF5 915 aa18.16■□□□□ 0.5
HMGN1-209ENST00000463631 KIAA1522Q9P206 1035 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-209ENST00000463631 MUC22E2RYF6 1773 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-209ENST00000463631 CELSR3Q9NYQ7 3312 aa18.16■□□□□ 0.5
HMGN1-209ENST00000463631 SMG1Q96Q15 3661 aaKnown RBP18.16■□□□□ 0.5
HMGN1-209ENST00000463631 HELZ2Q9BYK8 2649 aaKnown RBP18.15■□□□□ 0.5
HMGN1-209ENST00000463631 METTL12A8MUP2 240 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-209ENST00000463631 BCAT2O15382 392 aaPredicted RBP18.15■□□□□ 0.5
HMGN1-209ENST00000463631 CILPO75339 1184 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 DKK1O94907 266 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 RALAP11233 206 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 TMPRSS6Q8IU80 811 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 CPXM2Q8N436 756 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 C1orf216Q8TAB5 229 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 DUSP16Q9BY84 665 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 SLC2A11Q9BYW1 496 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 NIF3L1Q9GZT8 377 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 CCDC86Q9H6F5 360 aaKnown RBP18.15■□□□□ 0.5
HMGN1-209ENST00000463631 EXOC1Q9NV70 894 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 PCDHGB2Q9Y5G2 931 aa18.15■□□□□ 0.5
HMGN1-209ENST00000463631 SYNCRIPO60506 623 aaKnown RBP18.14■□□□□ 0.49
HMGN1-209ENST00000463631 SLFN14P0C7P3 912 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 COPAP53621 1224 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 BNC1Q01954 994 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 ENPEPQ07075 957 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 DCAF12L1Q5VU92 463 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 DBX2Q6ZNG2 339 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 SLCO6A1Q86UG4 719 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 FAM217AQ8IXS0 508 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 GRAMD1CQ8IYS0 662 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 CEP57L1Q8IYX8 460 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 PNPLA1Q8N8W4 532 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 PRCCQ92733 491 aaPredicted RBP18.14■□□□□ 0.49
HMGN1-209ENST00000463631 SIPA1Q96FS4 1042 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 DNAI2Q9GZS0 605 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 APOBEC3GQ9HC16 384 aaKnown RBP18.14■□□□□ 0.49
HMGN1-209ENST00000463631 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 ELOVL2Q9NXB9 296 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 DKK4Q9UBT3 224 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 PCDHA7Q9UN72 937 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 FNDC3AQ9Y2H6 1198 aaKnown RBP18.14■□□□□ 0.49
HMGN1-209ENST00000463631 FRMD4BQ9Y2L6 1034 aa18.14■□□□□ 0.49
HMGN1-209ENST00000463631 FLRT2O43155 660 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 ACTN4O43707 911 aaKnown RBP18.13■□□□□ 0.49
HMGN1-209ENST00000463631 PDIA4P13667 645 aaKnown RBP18.13■□□□□ 0.49
HMGN1-209ENST00000463631 CORO1AP31146 461 aaKnown RBP18.13■□□□□ 0.49
HMGN1-209ENST00000463631 MATKP42679 507 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 ME1P48163 572 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 ZNF234Q14588 700 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 TAS1R2Q8TE23 839 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 NUP58Q9BVL2 599 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 GAREM1Q9H706 876 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 IL21RQ9HBE5 538 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 TM7SF3Q9NS93 570 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 RASAL2Q9UJF2 1139 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 AGO1Q9UL18 857 aaKnown RBP18.13■□□□□ 0.49
HMGN1-209ENST00000463631 TRAF3IP3Q9Y228 551 aa18.13■□□□□ 0.49
HMGN1-209ENST00000463631 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.12■□□□□ 0.49
HMGN1-209ENST00000463631 CYBBP04839 570 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 MYL1P05976 194 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 PRKCHP24723 683 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 VAMP7P51809 220 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 EFEMP1Q12805 493 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 NUMA1Q14980 2115 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 NFIL3Q16649 462 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 KMT5BQ4FZB7 885 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 CEP135Q66GS9 1140 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 ATL3Q6DD88 541 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 INTS8Q75QN2 995 aaKnown RBP18.12■□□□□ 0.49
HMGN1-209ENST00000463631 ARHGAP18Q8N392 663 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 SETD7Q8WTS6 366 aaKnown RBP18.12■□□□□ 0.49
HMGN1-209ENST00000463631 PAGE5Q96GU1 130 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 CDC6Q99741 560 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 MIR1-1HGQ9H1L0 117 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 TOR4AQ9NXH8 423 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 MARCH2Q9P0N8 246 aa18.12■□□□□ 0.49
HMGN1-209ENST00000463631 SETXQ7Z333 2677 aaKnown RBP18.11■□□□□ 0.49
HMGN1-209ENST00000463631 TIMM44O43615 452 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 CD58P19256 250 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 AFF3P51826 1226 aaKnown RBP18.11■□□□□ 0.49
HMGN1-209ENST00000463631 PDE4CQ08493 712 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 CAMK2GQ13555 558 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-209ENST00000463631 HLA-BQ31612 363 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 RAB41Q5JT25 222 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 PPP1R26Q5T8A7 1209 aaPredicted RBP18.11■□□□□ 0.49
HMGN1-209ENST00000463631 SERPINA13PQ6UXR4 307 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 TMPRSS7Q7RTY8 843 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 PDZD3Q86UT5 571 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 DENND1CQ8IV53 801 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 TTC39CQ8N584 583 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 PLD4Q96BZ4 506 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 FAXDC2Q96IV6 333 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 UBXN6Q9BZV1 441 aa18.11■□□□□ 0.49
HMGN1-209ENST00000463631 OSGEPQ9NPF4 335 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms