RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 H0Y626 953 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 MAPK13O15264 365 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 TRIM16O95361 564 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 PENKP01210 267 aaPredicted RBP16.06■□□□□ 0.16
CMSS1-202ENST00000463526 CYBBP04839 570 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 HOXB3P14651 431 aaPredicted RBP16.06■□□□□ 0.16
CMSS1-202ENST00000463526 PSMC2P35998 433 aaKnown RBP16.06■□□□□ 0.16
CMSS1-202ENST00000463526 SYKP43405 635 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 GRIK2Q13002 908 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 TMPRSS6Q8IU80 811 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 ZCCHC9Q8N567 271 aaKnown RBP16.06■□□□□ 0.16
CMSS1-202ENST00000463526 DDI1Q8WTU0 396 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 NDRG1Q92597 394 aaKnown RBP16.06■□□□□ 0.16
CMSS1-202ENST00000463526 SIPA1Q96FS4 1042 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 SPATA32Q96LK8 384 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 CDK5RAP1Q96SZ6 601 aaKnown RBP16.06■□□□□ 0.16
CMSS1-202ENST00000463526 TMEM8AQ9HCN3 771 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 ITM2CQ9NQX7 267 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 MARCH2Q9P0N8 246 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 STRIP2Q9ULQ0 834 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 SLC27A6Q9Y2P4 619 aa16.06■□□□□ 0.16
CMSS1-202ENST00000463526 TSPAN3O60637 253 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 MYL1P05976 194 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 RPL13P26373 211 aaKnown RBP16.05■□□□□ 0.16
CMSS1-202ENST00000463526 TPMTP51580 245 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 NDUFA8P51970 172 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 YWHAGP61981 247 aaKnown RBP eCLIP16.05■□□□□ 0.16
CMSS1-202ENST00000463526 ARID5AQ03989 594 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 ZNF234Q14588 700 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 ZNF423Q2M1K9 1284 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 DCAF12L1Q5VU92 463 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 KRT39Q6A163 491 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 ANKS1BQ7Z6G8 1248 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 FAM124AQ86V42 546 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 PIGZQ86VD9 579 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 NAXDQ8IW45 347 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 SLC4A11Q8NBS3 891 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 PRCCQ92733 491 aaPredicted RBP16.05■□□□□ 0.16
CMSS1-202ENST00000463526 TATDN2Q93075 761 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 TMEM176AQ96HP8 235 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 ARID3AQ99856 593 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 CISHQ9NSE2 258 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 ELOVL2Q9NXB9 296 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 HPSEQ9Y251 543 aa16.05■□□□□ 0.16
CMSS1-202ENST00000463526 PCDH15Q96QU1 1955 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 A0A1B0GTW7 788 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 GJB3O75712 270 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 RHOBTB3O94955 611 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 EPHX1P07099 455 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 ACADMP11310 421 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 HLA-EP13747 358 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 PRKCHP24723 683 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 TKTL1P51854 596 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 RAD23BP54727 409 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 SLC14A1Q13336 389 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 HNRNPDQ14103 355 aaKnown RBP16.04■□□□□ 0.16
CMSS1-202ENST00000463526 RAB44Q7Z6P3 723 aaPredicted RBP16.04■□□□□ 0.16
CMSS1-202ENST00000463526 METTL3Q86U44 580 aaKnown RBP16.04■□□□□ 0.16
CMSS1-202ENST00000463526 ARHGAP18Q8N392 663 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 SETD7Q8WTS6 366 aaKnown RBP16.04■□□□□ 0.16
CMSS1-202ENST00000463526 PIWIL1Q96J94 861 aaKnown RBP16.04■□□□□ 0.16
CMSS1-202ENST00000463526 IL21RQ9HBE5 538 aa16.04■□□□□ 0.16
CMSS1-202ENST00000463526 USP36Q9P275 1121 aaKnown RBP16.04■□□□□ 0.16
CMSS1-202ENST00000463526 ZZEF1O43149 2961 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 ZFYVE26Q68DK2 2539 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 TULP2O00295 520 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 NPC1O15118 1278 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 FTH1P19P0C7X4 201 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 MXI1P50539 228 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 RING1Q06587 406 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 DPYDQ12882 1025 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 NFIL3Q16649 462 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 GOLGA7BQ2TAP0 167 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 TMEM215Q68D42 235 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 SERPINA13PQ6UXR4 307 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 SMYD4Q8IYR2 804 aaPredicted RBP16.03■□□□□ 0.16
CMSS1-202ENST00000463526 GUF1Q8N442 669 aaKnown RBP16.03■□□□□ 0.16
CMSS1-202ENST00000463526 DNASE2BQ8WZ79 361 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 SNX19Q92543 992 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 ULBP1Q9BZM6 244 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 RAB20Q9NX57 234 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 EIF2B4Q9UI10 523 aaKnown RBP16.03■□□□□ 0.16
CMSS1-202ENST00000463526 LHX6Q9UPM6 363 aa16.03■□□□□ 0.16
CMSS1-202ENST00000463526 METTL12A8MUP2 240 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 TAF4O00268 1085 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 BCAT2O15382 392 aaPredicted RBP16.02■□□□□ 0.16
CMSS1-202ENST00000463526 ZBED1O96006 694 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 OXTRP30559 389 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 GTF2H1P32780 548 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 COPAP53621 1224 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 SLC8A3P57103 927 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 SCAPQ12770 1279 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 ENPP2Q13822 863 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 COL9A2Q14055 689 aaPredicted RBP16.02■□□□□ 0.16
CMSS1-202ENST00000463526 RAB41Q5JT25 222 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 ARHGAP17Q68EM7 881 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 FMNL3Q8IVF7 1028 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 ZNF366Q8N895 744 aa16.02■□□□□ 0.16
CMSS1-202ENST00000463526 ANKRD52Q8NB46 1076 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms