RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SYNPOQ8N3V7 929 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 CPXM2Q8N436 756 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 RNF214Q8ND24 703 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 NT5C3BQ969T7 300 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 C2orf42Q9NWW7 574 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 CALCOCO1Q9P1Z2 691 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 FBXO10Q9UK96 956 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 HCN4Q9Y3Q4 1203 aa18.44■□□□□ 0.54
VPS52-214ENST00000463486 A0A1W2PQJ5 194 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 K7EQS6 105 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 GRAP2O75791 330 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 PENKP01210 267 aaPredicted RBP18.43■□□□□ 0.54
VPS52-214ENST00000463486 DRD1P21728 446 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 SCNN1AP37088 669 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 EIF2DP41214 584 aaKnown RBP18.43■□□□□ 0.54
VPS52-214ENST00000463486 TBX4P57082 545 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 SNX16P57768 344 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 CENPCQ03188 943 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 GRSF1Q12849 480 aaKnown RBP eCLIP18.43■□□□□ 0.54
VPS52-214ENST00000463486 TRNP1Q6NT89 227 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 PKN3Q6P5Z2 889 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 TRIM72Q6ZMU5 477 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 C1orf210Q8IVY1 113 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 SLC30A5Q8TAD4 765 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 IPO4Q8TEX9 1081 aaKnown RBP18.43■□□□□ 0.54
VPS52-214ENST00000463486 AZIN2Q96A70 460 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 PRRX2Q99811 253 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 TRIM62Q9BVG3 475 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 TMEM59LQ9UK28 342 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 TLR6Q9Y2C9 796 aa18.43■□□□□ 0.54
VPS52-214ENST00000463486 TRIM24O15164 1050 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 IRAK2O43187 625 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 AP5Z1O43299 807 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 CACNG3O60359 315 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 TULP3O75386 442 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 DAB1O75553 588 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 LATS1O95835 1130 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 TRUB2O95900 331 aaKnown RBP18.42■□□□□ 0.54
VPS52-214ENST00000463486 CISD3P0C7P0 127 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 TDGF1P13385 188 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 PRKCIP41743 596 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 HARS2P49590 506 aaKnown RBP18.42■□□□□ 0.54
VPS52-214ENST00000463486 LRRC32Q14392 662 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 DCAF6Q58WW2 860 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 FAM133BQ5BKY9 247 aaKnown RBP18.42■□□□□ 0.54
VPS52-214ENST00000463486 MMS22LQ6ZRQ5 1243 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 TPGS1Q6ZTW0 290 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 TOGARAM2Q6ZUX3 1019 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 PHF13Q86YI8 300 aaPredicted RBP18.42■□□□□ 0.54
VPS52-214ENST00000463486 NAT16Q8N8M0 369 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 SERPINB11Q96P15 392 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 NUP58Q9BVL2 599 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 SYNCQ9H7C4 482 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 WDR35Q9P2L0 1181 aa18.42■□□□□ 0.54
VPS52-214ENST00000463486 KCNU1A8MYU2 1149 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 CAPN9O14815 690 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 GYPCP04921 128 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 TYRP14679 529 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 TFE3P19532 575 aaPredicted RBP18.41■□□□□ 0.54
VPS52-214ENST00000463486 CHKAP35790 457 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 MATKP42679 507 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 ANGPT1Q15389 498 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 ANO4Q32M45 955 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 ADGRF1Q5T601 910 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 HGSNATQ68CP4 663 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 RNF43Q68DV7 783 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 NADSYN1Q6IA69 706 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 ZNF571Q7Z3V5 609 aaPredicted RBP18.41■□□□□ 0.54
VPS52-214ENST00000463486 BNIPLQ7Z465 357 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 SPEM1Q8N4L4 309 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 PNKPQ96T60 521 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 NPY6RQ99463 290 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 IER2Q9BTL4 223 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 BBS2Q9BXC9 721 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 PRMT8Q9NR22 394 aaPredicted RBP18.41■□□□□ 0.54
VPS52-214ENST00000463486 HCN2Q9UL51 889 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 CLEC4EQ9ULY5 219 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 CAPN11Q9UMQ6 739 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 ITIH6Q6UXX5 1313 aa18.41■□□□□ 0.54
VPS52-214ENST00000463486 KIAA1549LQ6ZVL6 1849 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 GOLGA6L7A0A1B0GV03 622 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 TCRBV5S1A1TA0A578 114 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 CHURC1-FNTBB4DL54 471 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 NEDD8-MDP1E9PL57 170 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 H0Y858 1186 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 KAT7O95251 611 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 HOXC13P31276 330 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 SLC6A4P31645 630 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 NOS2P35228 1153 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 FLT3P36888 993 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 ZC3H12AQ5D1E8 599 aaKnown RBP18.4■□□□□ 0.54
VPS52-214ENST00000463486 SFMBT2Q5VUG0 894 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 NUGGCQ68CJ6 796 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 MON1BQ7L1V2 547 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 ARCQ7LC44 396 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 GAS2L3Q86XJ1 694 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 UNC45BQ8IWX7 931 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 NELL1Q92832 810 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 MYEOVQ96EZ4 313 aa18.4■□□□□ 0.54
VPS52-214ENST00000463486 HAUS4Q9H6D7 363 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms